Campylobacter jejuni subsp. jejuni MTVDSCj20: MTVDSCj20_0027
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Entry
MTVDSCj20_0027 CDS
T03388
Symbol
recJ
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cjv
Campylobacter jejuni subsp. jejuni MTVDSCj20
Pathway
cjv03410
Base excision repair
cjv03430
Mismatch repair
cjv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cjv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MTVDSCj20_0027 (recJ)
03430 Mismatch repair
MTVDSCj20_0027 (recJ)
03440 Homologous recombination
MTVDSCj20_0027 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjv03400
]
MTVDSCj20_0027 (recJ)
DNA repair and recombination proteins [BR:
cjv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MTVDSCj20_0027 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MTVDSCj20_0027 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MTVDSCj20_0027 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Response_reg
Motif
Other DBs
NCBI-ProteinID:
AII23782
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Position
34253..35824
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AA seq
523 aa
AA seq
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MKIINKNEIKKILASRFEKDLHTKLCDLPLPCCLKDAYKAANRIKEAVEKNEKVAIVGDY
DVDGIISCVIMAEFFDDIGFDYIVRIPNRFKDGYGLNAEIINELDVNLIITVDNGIAAIE
AAKLCKEKNIDLIITDHHMPQDVLPDAFAIINPKQKDCDFPEIEICGAQVAWYLIAALKE
VCKLKYDMSKFLELLAIAIIADMMELRDLNRALVRRGIDHINKSKRAAFRAIKHYYQKDK
FALDNIGFLIAPLINSAGRMDDASISYEFLHTKDFNKALEYLEQIVSFNESRKDEEKQLF
EDSLNQIDENDSCIVVSGLNWHEGVLGIVASRLAKHFNKPAFVFSQNEEHLKGSARSVGK
IDILALISKTNSILSNYGGHKGAAGISLNSENFEQFKNKIKKECSQISESEFLDTDEILG
ILEPSEIDFEMLEILESFEPFGHKNPRPFFVLENLCVKNKKLLGKDEKHLKLILTKENKT
IEALFFNFDKEPELNQNISLLGSISKNEFRGLVTPQFVIKEIL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaagataattaataaaaatgaaattaaaaaaattttggcttcacgctttgaaaaagat
ttgcataccaaactttgtgatctgcctttgccatgctgtttaaaggatgcatataaagca
gctaatcgcatcaaagaagctgtagaaaaaaatgagaaagtcgccatagtaggggattat
gatgttgatggaatcatttcttgtgttattatggcagaatttttcgatgatataggtttt
gattatatagtaagaattccaaatcgttttaaagatggatatggattaaatgctgagatt
atcaacgaacttgatgtgaatttaataataacagtagataatggaatagctgctattgaa
gcagccaaactctgcaaagaaaaaaatatagatttgattatcactgatcatcatatgcct
caagatgttttgcctgatgcttttgccattatcaatccaaagcaaaaagattgtgatttt
ccagaaattgaaatttgtggagctcaagtggcatggtatttgatagcagctttaaaagaa
gtttgcaagcttaaatacgatatgagtaaatttttagaacttttggcgattgcaattatt
gcagatatgatggagcttagagatttaaatcgtgctttagtaaggcgtggtatagatcat
attaacaaatctaaaagagctgcttttcgggctattaagcattattatcaaaaggataaa
tttgctcttgataatataggatttttaattgctccgcttataaatagtgctggaagaatg
gatgatgcaagtatttcttatgaatttttacacactaaagattttaataaagctttagaa
tatctagagcaaattgttagttttaatgaaagtcgtaaagatgaagaaaaacagcttttt
gaagatagtttaaatcaaatcgatgaaaacgattcttgtattgtggtatcgggtttaaat
tggcatgaaggggttttagggattgtggcaagtcgtttagctaaacattttaataaacct
gcttttgtattttctcaaaatgaagaacacttaaaaggtagcgcaagaagtgttggcaag
attgatattttagctttaatttctaagacaaattctatattaagcaattatggtggtcat
aaaggtgctgctggaatcagtttaaactctgaaaattttgaacaatttaaaaataaaatc
aaaaaagaatgttcgcaaatttctgaaagtgaatttttggatacagatgaaattttagga
atcttagaacctagtgaaattgattttgaaatgcttgaaattttagaatcttttgaacct
tttggacataaaaatccacgacctttttttgttttagaaaatctttgtgtaaaaaataaa
aaacttctaggtaaagatgaaaaacacttaaagcttattttaaccaaggaaaataaaacc
atagaagctttattttttaattttgataaagagccagaattgaatcaaaatatttctttg
cttggaagtatttctaagaatgaatttagaggattagtaactccacaatttgttattaaa
gaaattttataa
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