Campylobacter jejuni subsp. jejuni MTVDSCj20: MTVDSCj20_0740
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Entry
MTVDSCj20_0740 CDS
T03388
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cjv
Campylobacter jejuni subsp. jejuni MTVDSCj20
Pathway
cjv03030
DNA replication
cjv03430
Mismatch repair
cjv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cjv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTVDSCj20_0740 (dnaE)
03430 Mismatch repair
MTVDSCj20_0740 (dnaE)
03440 Homologous recombination
MTVDSCj20_0740 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjv03032
]
MTVDSCj20_0740 (dnaE)
03400 DNA repair and recombination proteins [BR:
cjv03400
]
MTVDSCj20_0740 (dnaE)
Enzymes [BR:
cjv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MTVDSCj20_0740 (dnaE)
DNA replication proteins [BR:
cjv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MTVDSCj20_0740 (dnaE)
DNA repair and recombination proteins [BR:
cjv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MTVDSCj20_0740 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
ACT_ACR9_3rd
Motif
Other DBs
NCBI-ProteinID:
AII24461
LinkDB
All DBs
Position
711889..715491
Genome browser
AA seq
1200 aa
AA seq
DB search
MSQFTHLHLHTEYSLLDGANKLKELALTLKEQGATSVAMTDHGNMFGAIDFYQTMKAQGL
KPIIGMEAYLHNHDELDDKSSRQRFHLCLYAKNEIGYQNLMYLSSQSYIKGLYYYPRINK
KLLEDHSEGLICSSACLQGEVNWHLNTYSERNVRFGAKGYEAAKEAALWYKKVFKDDFYF
EIMRHGIGDQRMIDDDIIRLSKELNIKIIATNDTHYTFKERAAAHEVFMCIAMGKKLNDP
DRMRHSVHEFYVKSPEQMSELFADIPEAIENTQEIAQKCNLELNLGNPTPPNFKFTREYA
KDHNITLPEETKEFSFDNDDIVFEELCKKGLEERLKFIDESKHEEYKQRLEVEINIIKNM
KFSGYMLIVHDFIKVAKDKGIPVGPGRGSAAGSLVSYCLRITDLDPIPYSLLFERFLNPE
RVSMPDIDVDFCQDRRAEVIDYVIDKYGADKVAQVITFGKLLAKGVIRDVARVCDMSIQD
ADELAKLVPEELKITLDAAYEKEPKIKEFIDRHPKGPEVWEYARALEGLNRNAGMHAAGV
VISNESLWKKTPLFRQSKNDERHLVTQYSKDHLEDVDLIKFDFLGLKTLTVINNAIKLIK
KRYNKDIIWETIDVNDSKVYKTIQSGNTLGIFQIESGGMQSLNARLKPERFEDIIAVLAL
YRPGPMESGMLDDFIDRKHGLKSIEYPFDSLEKVLEPTYGVIVYQEQVMQIVQIIGGFSL
GGADVVRRAMGKKDPEKMKKLKTDFADGAEKQGYDRAKAEDLWELIVKFAGYGFNKSHSA
AYALITFQTAYLKTYYPSEFMAALLTSEENNVDKIAVYIDEMKKMNIKLLPPSINKAIRE
FSALEQDGKDAIIYGLGAIKSVGIPAVENLLEARQDGEFKDINDFLGKIDPTKINRRTLE
SLIKAGAFDEFGFTRKALFDNMENLSEASRKMAEVRKNAASSLFGEEELTSGVQVNFTPK
NEEFEVMEKLGYEKEILGIYVSGHPLDRFYEQINAIDYVKSLDFESLKNNGEILSIGKIE
DFKSMMSKNNKRYGRIEILDYYSSFDATVFESNVEEIENIIKDENLKNNAYGFVLGFKAE
GGEKPSFFLKAIKDLQSLEDGEIKAIKKFGAKKDFKNKEENHFTAEPKEFEKNIIELDLT
RLNRELIYEIHEIARNAHNPNEKNNKKLVLKVISAGSCLLYHTDFIISDSIVEEISNKYA
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatttacacacttacatttacatacagaatattctttgcttgatggagccaat
aagcttaaagaattagctttgactttaaaagagcagggtgctacaagtgtggctatgaca
gatcatggaaatatgtttggggcaattgatttttatcaaacaatgaaagcacaaggttta
aaacctatcattggtatggaagcgtatttgcataatcacgatgaattagatgataaaagt
tctcgtcagcgttttcacctttgtttgtatgcaaaaaatgagatcggatatcaaaattta
atgtatttaagttctcaaagttatattaaaggtttgtattattatccgcgtatcaataaa
aagcttttggaagatcatagcgaaggtcttatttgttcttctgcttgcttgcaaggtgaa
gtaaattggcacttaaatacttatagtgaaagaaatgtgcgttttggtgcaaaaggctat
gaagcagcaaaagaagcggcgctatggtataaaaaagtttttaaagatgatttttatttt
gaaatcatgcgtcatggtataggcgatcaaagaatgatagatgatgatattatcagactt
tctaaagaattaaatataaaaattattgctacaaatgatacgcattatactttcaaagaa
agagcggctgcccatgaggtttttatgtgtatagctatgggaaaaaaacttaatgatcct
gatagaatgcgtcatagtgtgcatgaattttatgttaaaagccctgagcaaatgagtgag
ctttttgcagatattccagaagctatagaaaatacacaagaaatcgcgcaaaaatgtaat
ttagagcttaatcttggcaatcccactccaccgaattttaaatttacaagagaatatgct
aaagatcataatattaccttgcctgaagaaacaaaagaatttagctttgataatgatgac
atagtttttgaagaactttgtaaaaagggacttgaagagagattaaaatttatcgatgaa
agcaagcatgaagaatacaaacaaagacttgaagtagaaattaacatcattaaaaatatg
aaattttcaggttatatgcttattgttcatgattttattaaagtggctaaagataaaggt
attccagtaggccctggaagaggatcagctgcgggaagtttggtttcttattgtttaagg
attacggatttagatcctattccttatagtctactttttgagcgttttttaaatcctgag
cgtgtgagcatgcctgatattgatgtggatttttgtcaagacagacgtgctgaagtgatt
gactatgtgattgataaatatggagcagataaagttgcacaggtgattacctttggtaaa
cttttggctaaaggggtgattcgtgatgtggctagagtttgtgatatgagtattcaagat
gctgatgagcttgctaaacttgtgcccgaagagcttaaaatcactcttgatgctgcttat
gaaaaagaacctaaaattaaagaatttatcgatcgtcatcctaaaggtcctgaagtttgg
gagtatgcaagagctttagaaggattaaatcgcaatgcgggtatgcacgcagcaggtgtt
gtaatttctaatgaaagtttatggaagaaaactccgctttttagacaaagtaaaaatgat
gaaagacatttggtaacgcagtattctaaagatcatttagaagatgtggatttgataaaa
tttgactttttaggtcttaaaaccttaacagtaatcaataatgcgatcaagcttattaaa
aagcgttacaataaagacattatttgggaaactatagatgtaaatgatagcaaagtttat
aaaaccatacaaagtggaaatactttgggaatttttcaaatcgaatcaggcggtatgcaa
agtttaaatgcacgcttaaaaccagagcgttttgaagatatcattgcggttcttgcgctt
tatcgtccaggtcctatggaatcaggaatgcttgatgattttatcgacagaaagcatggt
ttaaaaagtatagaatatccttttgacagtttagaaaaggttttagagcctacttatggg
gttattgtttatcaagaacaggttatgcaaattgttcaaattataggtggcttttcttta
ggaggtgctgatgtagtgcgtcgtgctatgggtaaaaaagatcctgagaagatgaaaaag
cttaaaactgattttgcagatggagcagaaaaacaaggatatgatagagcaaaagctgag
gatttatgggagcttatcgtaaaatttgcaggatatggttttaataaatctcactctgcg
gcttatgcgttgattacttttcaaacagcttatttaaaaacttattatcctagtgaattt
atggcagcgcttttaacaagcgaagaaaacaatgtggataaaattgctgtttatattgat
gagatgaaaaaaatgaatattaaacttttacctccatcgattaacaaagcgatccgtgaa
tttagtgctttagagcaagatggcaaggatgctattatatacggacttggggctataaaa
agtgtgggtattcctgcagttgaaaatttacttgaagcaagacaagatggagaatttaag
gatattaatgatttcttgggtaagatagatcctaccaagataaaccgcagaacattagaa
agtcttattaaggcaggggcttttgatgagtttggttttacgagaaaagctttgtttgat
aatatggaaaatcttagcgaagcatcgcgtaagatggctgaagtaagaaaaaatgctgca
agttctctttttggtgaagaggaattaacttcaggtgttcaagtaaattttactcccaaa
aatgaagaatttgaagtgatggaaaaattaggatatgaaaaagaaattttaggaatttat
gtttcaggccatcctttagatcgattttatgaacaaattaatgccatagattatgttaaa
agtttagattttgaaagtttaaaaaacaatggagaaattttaagtataggtaaaattgaa
gatttcaaatccatgatgagtaaaaataataagcgttatggtagaattgaaattttggat
tattattcttcgtttgatgctactgtatttgaaagcaatgtagaagaaatagaaaatatc
atcaaagatgaaaatttaaaaaataatgcctatggttttgtattgggatttaaagctgag
ggaggggagaagcctagcttttttttaaaagcaattaaagatttacaaagtcttgaagat
ggcgagattaaagctataaaaaaatttggagcaaaaaaagatttcaaaaataaagaagaa
aatcattttaccgcagaacctaaggaatttgaaaaaaatatcatagagctagatttgaca
aggttaaatagagaattaatctatgaaattcatgaaattgctagaaatgcacataatcct
aatgaaaaaaacaataaaaaacttgttttaaaagttattagcgcgggatcttgcttgctt
tatcatacagattttattatctctgatagtatagtagaggaaatttctaataaatatgct
taa
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