Campylobacter jejuni subsp. jejuni 00-6200: PJ18_05975
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Entry
PJ18_05975 CDS
T03792
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cjw
Campylobacter jejuni subsp. jejuni 00-6200
Pathway
cjw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PJ18_05975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjw03019
]
PJ18_05975
Messenger RNA biogenesis [BR:
cjw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PJ18_05975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
KH_1
KH_2
dUTPase
KH_KhpA-B
MurD-like_N
DUF4945
DUF3450
MS_channel_1st_1
Motif
Other DBs
NCBI-ProteinID:
AJK73032
LinkDB
All DBs
Position
1138956..1140509
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AA seq
517 aa
AA seq
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MIESLIALIAAIVGLGIGYLVAKKINDAKYEIFVEQAKAKAKAIEYEAELILKDAKNSIL
NAELEVKKKYEEKTHKFQKDFNQKFDDLSKKEQKLQQEEEKLKEDKEYLCKSQKHIQNLQ
SDVDKLKNKYQEKLDDVLKILEHSTGLTQNEAKEIILKKVEENSREQIAHIVRKYEEEAK
NEAKRKANFIIAQATSRFAGEFAAERLINVINIKNDELKGRIIGKEGRNVKTLEMVLGVD
IIIDDTPGAIIVSCFNLYRRAIATKVIELLVEDGRIQPARIEEIHEKVCKEFDSAILEEG
ETIVMDLGLNKIHPEIVKLIGKLKYRASYGQNALAHSLEVAHLAGIIAAECGGDENLARR
AGILHDIGKALTHDFEGSHVDLGAELCKRYKEHPVVINAIYAHHGHEEATSIESAAVCAA
DTLSAARPGARREVLEAFLKRVSELEDIAKSKEGIKNAYAINAGREIRVIANAQLVNDDE
SVLLAKEIAAEIQEKMQYPGEIKVNVIRELRAVEYAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgatagaatcacttatcgcacttatagccgctatagtcggactcggtataggatattta
gttgcaaaaaaaatcaatgatgccaaatatgaaattttcgtagaacaagccaaagctaaa
gccaaagctatagaatacgaagcggagcttattttaaaagatgcaaaaaattcaattctt
aatgcagaattagaagttaaaaaaaaatacgaagaaaaaactcacaaatttcaaaaagat
tttaatcaaaaatttgatgatctttctaaaaaagaacaaaaacttcagcaagaagaagaa
aaactaaaagaagataaagaatacctttgcaagtcacaaaaacacattcaaaacttacaa
tctgatgttgataaattaaaaaataaatatcaagaaaaacttgacgatgttttaaaaatt
ttagaacattcgacaggacttacacaaaatgaagccaaagaaatcattcttaaaaaagta
gaagaaaattctcgcgagcaaattgcacatatagtaagaaaatatgaagaagaagcaaaa
aatgaagctaaaagaaaagctaatttcatcattgctcaagctacttctcgttttgcaggt
gaatttgcagctgaaagacttatcaatgttattaacattaaaaacgatgaacttaaagga
cgtatcattggtaaagaagggcgcaatgttaaaaccttggaaatggttttaggtgttgat
attatcatcgatgatacaccaggtgctattatagtaagttgttttaatctttatcgccgt
gctattgctacaaaagttatagaacttttagttgaagatggcagaattcaacccgcgcgc
atagaagaaattcacgaaaaagtgtgtaaagaatttgatagtgccattctagaagaaggc
gaaaccatagttatggatctaggtttaaataaaatacaccctgaaattgtaaaactcata
ggaaaactcaaataccgagcaagctatggacaaaacgctttagcacattctttggaagtg
gctcaccttgcaggaatcattgctgctgagtgtggtggagatgagaatttagcacgtcgt
gcgggaattttacatgatataggaaaagcattaacccatgattttgaaggatctcatgtg
gatttaggtgcagaactttgcaaacgctacaaagagcatcctgtagtaatcaatgctatt
tacgcacatcatggacacgaagaagctacaagcatagaatcagcagctgtttgtgcagca
gatactttaagtgctgcacgacctggagctagaagagaagtgttagaagctttcttaaaa
agagtcagtgagctagaagatatcgctaaaagtaaagaaggaattaaaaatgcctatgca
atcaatgccggaagagaaattcgcgtcatagccaatgctcagcttgttaatgatgatgaa
agtgtacttttagctaaggaaatagcagctgaaattcaagaaaaaatgcaatatcctggt
gaaattaaagtcaatgttatacgtgaacttagagctgtagaatacgctaaataa
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