Campylobacter jejuni subsp. jejuni YH001: QZ67_00003
Help
Entry
QZ67_00003 CDS
T03744
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cjy
Campylobacter jejuni subsp. jejuni YH001
Brite
KEGG Orthology (KO) [BR:
cjy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjy03032
]
QZ67_00003 (gyrB)
03400 DNA repair and recombination proteins [BR:
cjy03400
]
QZ67_00003 (gyrB)
Enzymes [BR:
cjy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
QZ67_00003 (gyrB)
DNA replication proteins [BR:
cjy03032
]
Prokaryotic type
DNA Topoisomerases
QZ67_00003 (gyrB)
DNA repair and recombination proteins [BR:
cjy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QZ67_00003 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AJA54119
LinkDB
All DBs
Position
2579..4888
Genome browser
AA seq
769 aa
AA seq
DB search
MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV
EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDTYKVSGGLHGVGVS
VVNALSKKLVATVERNGEIYRQEFSEGKVISEFGVIGKSKKTGTTIEFWPDDQIFEVTEF
DYEILAKRFRELAYLNPKITINFKDNRVGKHESFHFEGGISQFVTDLNKKEALTKAIFFS
VDEEDVNVEVALLYNDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTRVISNYIEANASAR
EKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSTYVRPIVSKASFEYLTKYFEEN
PIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQSKDPSESEIYLVE
GDSAGGSAKQGRERSFQAILPLRGKILNVEKARLDKILKSEQIQNMITAFGCGIGEDFDL
SKLRYHKIIIMTDADVDGSHIQTLLLTFFFRFMNELVTNGHIYLAQPPLYLYKKAKKQIY
LKDEKALSEYLIETGIEGLNYEGIGMNDLKDYLKIVAAYRAILKDLEKRFNVISVIRYMI
ENSNLVKANNEELFSVIKQFLETQGHNILNHYINENEIRAFVQTQNGLEELVINEELFTH
PLYEEASYIFDKIKDRGLEFDKDILEVLEDVETNAKKGATIQRYKGLGEMNPEQLWETTM
DPSVRRLLKITIEDAQSANDTFNLFMGDEVEPRRDYIQAHAKDVKHLDV
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaattatggtgcgagtaatattaaagtcttaaaaggcttagaagctgttaga
aaacgcccaggtatgtatataggagatacaaacataggcggacttcatcatatgatttat
gaagttgtggataattctattgatgaagctatggcaggacattgtgatactatagatgta
gaaatcactactgaaggaagctgtatagttagtgataatggtcgtggtattcctgttgat
atgcacccaactgaaaatatgccaactttaactgttgttttaactgtcctacatgcaggg
ggaaaattcgataaagatacttataaagtttcaggcggtttgcacggtgttggggtttcg
gttgtaaatgcactttctaaaaaacttgtagctacagttgaaagaaatggagaaatttat
cgtcaagaattttcagaaggtaaagttatcagtgaatttggtgtgataggaaaaagtaaa
aaaacaggaacaactatagaattttggcctgatgatcaaatttttgaagtgactgaattt
gattatgaaattttggctaaaagatttcgtgaacttgcatacttaaatccaaaaatcact
ataaattttaaagataaccgcgtaggcaaacatgaaagttttcactttgaaggtggaatt
tctcagtttgttacagacttaaataaaaaagaagctttaactaaagcaattttctttagc
gtagatgaagaagatgtgaatgttgaagtagctttgctttacaatgatacttatagtgaa
aatttactctcttttgtaaataatatcaaaactccagatggtggaacacacgaagctggt
tttagaatgggtttaactcgtgtgataagtaactatatagaagcaaatgcaagtgctaga
gaaaaggataataaaatcacgggtgatgatgtgcgtgaaggtttgatcgctattgtgagt
gtaaaggtgcctgaaccacaatttgaaggacaaaccaaaggaaaacttggttcaacttat
gtgcgtcctatagtttcaaaagcaagttttgaatatttgactaaatattttgaagaaaat
cctatcgaagctaaagctataatgaacaaagccttaatggcagctagaggaagagaagca
gcgaaaaaagctagagaattaacgcgtaaaaaagaaagtttaagcgtaggaactttacca
gggaaattagctgattgtcaaagtaaagatccaagtgaaagtgaaatttatcttgtggaa
ggggattctgcaggaggttctgcaaaacaaggtagagaaagatctttccaagctatactg
cctttgcgtggtaaaattttaaatgttgaaaaagcaagattagataaaattttaaaatct
gagcaaattcaaaatatgattaccgcttttggctgtggtataggtgaagattttgatctt
tcaaaacttagatatcataaaatcatcatcatgacagatgcggatgttgatggatcacat
atacaaaccttgcttttaactttcttcttccgttttatgaatgaacttgtgacaaatgga
catatttatttagcacaaccacctttatatctttataaaaaagctaaaaagcaaatttat
ttaaaagatgaaaaagctttgagcgaatacctgatagaaacaggaatagaaggtttaaac
tatgaaggtataggaatgaatgatttaaaagattatttaaaaatcgtcgcagcttatcgt
gcgattttaaaagatcttgaaaagcgttttaatgtgatttctgtgatacgctatatgata
gaaaattcaaatttagttaaagcaaataatgaagaattatttagtgtaatcaaacaattt
ttagaaacacaaggacacaatatcttaaatcattatatcaatgaaaatgaaattcgagct
ttcgttcaaactcaaaatggcttagaagaacttgtgatcaatgaagaacttttcactcat
ccactatatgaagaagcaagttatatttttgataagattaaagatagaggcttggaattt
gataaagatattttagaagttcttgaagatgttgaaaccaatgctaaaaaaggtgctact
atacaacgctataaaggtttaggggaaatgaatcctgagcaactttgggaaaccacaatg
gatccaagcgtaagaagacttttaaaaatcactattgaagatgcacaaagtgcaaatgat
acctttaatctctttatgggtgatgaggttgaaccaagacgcgattatatccaagcgcac
gctaaagatgtaaagcatttggatgtgtaa
DBGET
integrated database retrieval system
