Comamonas kerstersii: B5M06_01745
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Entry
B5M06_01745 CDS
T04758
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cke
Comamonas kerstersii
Pathway
cke03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B5M06_01745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cke03019
]
B5M06_01745
03016 Transfer RNA biogenesis [BR:
cke03016
]
B5M06_01745
Enzymes [BR:
cke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
B5M06_01745
Messenger RNA biogenesis [BR:
cke03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B5M06_01745
Transfer RNA biogenesis [BR:
cke03016
]
Prokaryotic type
tRNA degradation factors
B5M06_01745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
OB_RRP5_4th
S1_RRP5
DUF5813
aRib
KH_KhpA-B
S1_2
DNA_pol3_a_NI
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AQZ97174
UniProt:
A0A1V0BBI9
LinkDB
All DBs
Position
complement(378275..380461)
Genome browser
AA seq
728 aa
AA seq
DB search
MTMFNKVTKTFKWGQHTVTMETGEIARQASGAVLVNMDDTVVLATVVGSKQAKAGQDFFP
LTVDYIEKTYAAGKIPGSFFKREAKPSELETLTSRLIDRPIRPLFPEGFYNDVHVVIHTI
SLNPEVDADIAAMIATSAALAVSGIPFNGPIGAARVGYINGEYVLNPGQTQRKDSLMDLV
VAGTETAVLMVESEAQQLPEEVMLGAVVYGHEQGKIAIDAIHDLVREGGKPAWDWTPPAK
DEALIAKVTELGEELLRAAYQQRNKQVRTQACREAYAKVKDALAAQGVEFDAVKVEGMLF
DIEARIVRSQILAGEPRIDGRDTRTVRPIEIRTSVLPRTHGSALFTRGETQALVVTTLGT
ERDAQKIDALAGEFDDSFIFHYNMPPFATGEVGRMGSTKRREIGHGRLAKRALVACLPSK
DEFPYTVRVVSEITESNGSSSMASVCGGCLSLMDAGVPMKAHVAGIAMGLIKEDNRFAVL
TDILGDEDHLGDMDFKVAGTTNGITALQMDIKIQGITKEIMQVALAQAKEARMHILGKMQ
EAMGEAKAEISSFAPKLFTMKINPEKIRDVIGKGGATIRALTEETGTQINIEEDGTITIA
ATDGDKAEAAKKRIEEITAEVEIGKIYEGPIVKILDFGALVNLLPGKDGLLHISQIAHER
VEKVTDYLKEGQVVKVKVLETDDKGRVKLSMKALLERPAPAERAERAERQPRGEHRAAPE
AGEQPQQQ
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgttcaacaaggtcaccaagactttcaagtggggtcagcacacggtcaccatg
gaaacgggcgaaattgcacgccaggcttccggtgctgtgctggtgaatatggacgacacc
gtggtactggctaccgtggtgggctccaagcaggccaaggctggtcaggatttcttccct
ctgaccgtggactacatcgagaagacctacgcagccggcaagatccctggcagcttcttc
aagcgtgaagccaagccctcggagctggaaacgctgacttcgcgtctgatcgaccgtcct
atccgtcctctgttccccgaaggtttctacaacgatgtgcacgtggtgatccacaccatc
tcgttgaaccctgaagtggatgccgacatcgccgccatgattgccacttccgcagcgctg
gctgtgtctggcattcctttcaatggtcctattggtgctgcccgcgtgggttacatcaat
ggcgaatacgtgctgaaccccggtcagacgcagcgcaaggattcgctgatggatctggtg
gtggcaggtactgaaaccgctgtgctgatggtggaatccgaagcgcagcaactgcctgaa
gaagtgatgctgggtgctgtggtctatggccacgagcaaggcaagattgcaattgacgcc
atccatgatctggtgcgtgaaggtggcaagcccgcttgggactggacgcctccagccaag
gatgaggcgctgatcgccaaggtgaccgagctgggtgaagagctgctgcgcgcagcctat
cagcagcgtaacaagcaagtgcgtacgcaagcctgccgcgaggcctatgccaaggtcaag
gatgcgctggccgcgcaaggcgtggagttcgatgctgtcaaggtcgaaggcatgctgttt
gacatcgaagcacgcatcgtgcgctcgcagattctggcaggtgagccccgtatcgacggc
cgtgacacacgtactgtgcgccccatcgaaatccgtacttccgtgctgcctcgcacccac
ggttcggccctgttcacacgcggcgaaacccaggcgctggttgtgaccacgctgggtaca
gagcgtgatgcacagaagatcgacgcgttggcgggtgagtttgatgattccttcatcttc
cactacaacatgcctccttttgcaaccggtgaagtcggtcgcatgggttcgaccaagcgc
cgcgaaatcggtcacggtcgtctggccaagcgcgcactggtggcttgtctgccttccaag
gacgaattcccttacaccgttcgcgtggtgtcggaaatcacggaatccaacggttcttcg
tccatggcttcggtgtgcggcggctgcctgtcgctgatggatgctggtgtacccatgaag
gcgcacgtggcgggtatcgccatgggcctgatcaaggaagacaaccgctttgccgtgctg
accgacattctgggtgacgaggatcacctgggcgacatggacttcaaggtggccggtacg
accaacggtattaccgccctgcagatggacatcaagatccagggtatcaccaaggaaatc
atgcaagtggcactggctcaggccaaggaagcgcgcatgcacatcctgggcaagatgcag
gaagccatgggtgaagccaaggcggaaatctcttccttcgcgcccaagctgttcacgatg
aagatcaaccccgagaagatccgtgatgtgatcggcaagggtggcgccactatccgtgcg
ctgaccgaagaaaccggtacccagatcaatatcgaggaagacggcaccatcaccatcgct
gcaaccgacggcgacaaggcggaggctgccaagaagcgcatcgaagagatcacggctgaa
gtggagatcggcaagatctatgaaggccccatcgtcaagattctggacttcggcgcactg
gtgaacctgctgcccggcaaggatggtctgctgcacatcagccagatcgcccacgagcgc
gtagagaaggtgactgactacctgaaggagggtcaggttgtgaaggtcaaggtgctggaa
actgacgacaagggtcgcgtgaagctgtccatgaaggcgctgctggagcgtcctgcacct
gcagagcgtgcagagcgtgccgagcgtcagcctcgtggtgaacaccgcgcagcacctgag
gctggcgagcagcctcagcagcaataa
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