Comamonas kerstersii: B5M06_02300
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Entry
B5M06_02300 CDS
T04758
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cke
Comamonas kerstersii
Brite
KEGG Orthology (KO) [BR:
cke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cke03016
]
B5M06_02300
Enzymes [BR:
cke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
B5M06_02300
Transfer RNA biogenesis [BR:
cke03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B5M06_02300
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Myosin_N
Motif
Other DBs
NCBI-ProteinID:
AQZ97270
UniProt:
A0A1V0BBM1
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All DBs
Position
493580..495658
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AA seq
692 aa
AA seq
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MHALFEDAGKFLAGRILSEADASSQVELASGKRVKVKAAHILLKFEKPEPAVLMAEAEAI
ASTIELDLAWEFAPEEEFGFADLARDYFSDSAPNTQQIGMLFALYGAPHYFRRAGKGRFR
KAPAEILQQALAAIEKKKQIQAQIDGWAQELAAGTCPQPIREQLYKILFKPDKNAPEYKA
VVEASRSAQKAPLELLQAAGAIDSAYQFHWKRFLFENFPKGTRFPELTAPQPPEDLPVAN
VQAYSIDDSMTTEIDDALSVQGLGTGTVTLGIHIAAPGLAIEPGSDLDKLGRNRLSTVYM
PGYKITMLPDEVVQIYTLDEGRANPAVSLYVTYDEATLEVKDKVTKLERVPVVVNFRHDK
LDHIVTEEWLADPTLEVEGTPANLAERRQELMFLHRLAKHLKKGREEVRGKPENFSRPDY
TFRLEGNGDEEPNGSETVSISVRKRGAPLDLIVAEAAIVANSTWGGWLAELGVPGIYRSQ
ASMAPGVKVRMSTKALPHAGIGVKSYSWATSPLRRYVDLVNQWQIIACARHGATAALAAP
FKPKDAELFGIISSFDGAYSAYNGYQQSMERFWTLKYVEQNGITELDCAVIKDNGPNGIL
VRADTLPLVISIIGAQDLPRGARVRVKLGAIDEITLDIHGTVIERLDDPLDSSDDAPLDD
AAEDEDDVAAGPIAIAVDVNEADSTSADNPAP
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcattgtttgaagatgccggtaagtttttggccggccgtatcctgtctgaggcc
gatgcctcctcccaagtcgagctggcctctggcaagcgcgtcaaggtcaaggccgcccac
atcctgctcaagtttgaaaagcccgagcctgccgtcctgatggccgaagccgaggccatt
gcctccaccatcgagctggacctggcctgggaatttgcccccgaagaagaatttggcttt
gccgatctggcgcgcgactacttctcggacagcgcccccaacacccagcagatcggcatg
ctgtttgcgctgtatggcgcaccccactatttccgccgcgctggcaagggccgtttccgc
aaagcgcccgctgaaatcctgcagcaggcactggccgccattgaaaagaaaaagcagatc
caggcacagattgatggctgggcccaggaactggccgctggcacttgcccccagcctatt
cgcgagcagctgtacaagattctgttcaagcccgacaagaacgcgcccgagtacaaggcc
gtagtcgaagccagccgcagcgcacaaaaagcaccactggagctgctgcaggccgcaggt
gccatcgactcggcctaccagttccactggaagcgcttcctgttcgagaacttccccaag
ggcacacgcttccccgaactgacagccccccagccgcccgaagacctgccggtggcgaat
gtgcaggcctactccatcgacgactccatgaccacggaaatcgacgatgcactgtccgtg
cagggcctgggcaccggcaccgtgacgctgggcattcacattgccgcgcccggtctggcg
attgaacctggctcggatctggacaagctggggcgcaaccgcctgtccacggtctacatg
cccggctacaagatcaccatgctgcccgacgaagtcgtgcagatctacacactggacgaa
ggccgcgccaaccccgctgtgtcgctgtatgtgacctatgacgaggcaacgctggaagtc
aaggacaaagtcaccaagctcgagcgcgtgcctgtggtggtgaacttccgccacgacaag
ctggaccacatcgtgaccgaagaatggctggccgaccccacgctggaagtggaaggcacg
ccggccaatctggccgagcgccgccaggagctgatgttcctgcaccgcctggccaagcac
ctgaagaagggccgcgaggaagtgcgcggcaagccagagaacttctcgcgccccgactac
accttccgcctggaaggcaatggcgacgaagaacccaatggcagcgaaaccgtcagcatc
tccgtgcgcaagcgtggtgctccgctggacctgatcgtggccgaggccgccatcgtggcc
aacagcacctggggtggctggctggccgagctgggcgtgcccggcatctaccgcagccag
gccagcatggccccgggcgtgaaagtgcgcatgtcgaccaaggcactgccccacgcaggc
attggcgtcaagagctactcctgggccacttcgccgctgcgccgctatgtggacctggtc
aaccagtggcagatcattgcctgcgcacgccatggcgccaccgccgcgctggctgctccc
ttcaagcccaaggatgccgagctgttcggcatcatcagcagctttgacggcgcctacagc
gcctacaacggttaccagcagagcatggaacgcttctggacgctgaagtacgtggagcag
aacggcatcaccgagctggactgcgccgtcatcaaggacaacggccccaacggcattctg
gtgcgtgcagacacgctgccgctggtcatcagcatcatcggtgcgcaagacctgccccgt
ggtgcccgcgtgcgtgtgaagctgggcgcgattgacgaaatcacgctggatattcacggc
accgtgatcgaacggctggacgatccgctggactccagcgatgatgcaccccttgatgac
gctgccgaggatgaagacgatgtggctgcaggccccattgccatcgcggtggacgtcaat
gaagccgacagcaccagcgccgataatcctgcaccgtga
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