Comamonas kerstersii: B5M06_04580
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Entry
B5M06_04580 CDS
T04758
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cke
Comamonas kerstersii
Pathway
cke03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B5M06_04580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cke03400
]
B5M06_04580
Enzymes [BR:
cke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B5M06_04580
DNA repair and recombination proteins [BR:
cke03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B5M06_04580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
Helicase_RecD
SH3_13
AAA_22
PhoH
UvrD-helicase
SLFN-g3_helicase
DEAD
AAA_16
Mg_chelatase
AAA_28
nSTAND3
Herpes_Helicase
ResIII
AAA_5
AAA
Motif
Other DBs
NCBI-ProteinID:
AQZ97646
UniProt:
A0A1V0BCI3
LinkDB
All DBs
Position
complement(978876..980942)
Genome browser
AA seq
688 aa
AA seq
DB search
MSRKRHLDIHTLEMFAAEPAAPVTAHSVLEVLRLWADAGMLRRLDVALAVWLHEQDPQVQ
PCVLVAAAMLAQMEGRGHSCLPLADLVATPNAVLGWDAEDLPHLLALWERLPGTCAQWLQ
ALQACPLVRAATEADRAQPLVLAAVDSAHPLLYLRRYWDHERMVAAHILQRSTAAGVQLP
EQAAREWLDRFFPVASGAGCNWQKVACAVALRGRFSIITGGPGTGKTYTAARLLALLFAT
AAQPEQLRVALSAPTGKAAARLKESIETALKDLQQVVGDALDLEALVQRVGAARTLHSLL
GARPDTRHWGFHAGRPLDVDVLIVDEASMVHLEMMSALLDALPPHARLVLLGDKDQLASV
EAGAVLGDLCRDAQMGRYDAATVDYVARVAGEHIPAPFHADAMAPALAQQTVMLRESRRF
SGPIAELALAVNAGDVARSQALLAECGVYDPVFMQAGGAVQRVHQLAWQGRGTAVGYQPF
AQALQRWAAIEKASDIAVQHEGWVREVITAFERFRLLCAVREGEWGVAGLNAAVQQLLAR
LGVIPKEPGEWYRGRPVMVTRNDAALGVFNGDIGIALPSVAPGHPLRVYFLQGNQLHAVS
VARLVHVETAFAMTVHKSQGSEFEHTALVLSAKAGSVLGRELVYTGITRARSAFTLMAED
VRLLAQAIAAPTRRVSGLLRFLEGELKS
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcaaacgtcatctggatatccataccctggaaatgttcgcagccgaacctgca
gcacctgtgaccgcgcatagtgtgctggaggtgctgcgcctgtgggccgatgcaggcatg
ctgcggcggctggatgtggcgctggccgtgtggctgcatgaacaggacccgcaggtgcag
ccctgcgtgctagtggcggcagccatgctggcacagatggaagggcgcggtcacagctgc
ttgccgctggctgatctggtggctacgcccaatgcggtgctgggctgggatgcggaagac
ttgccccatctgctggccctgtgggagcgcctgccgggtacatgtgcgcaatggctgcag
gcactgcaggcatgtccactggtgcgtgcagccaccgaggcagaccgtgcccagcccctg
gtgctggctgcagtagatagcgcccaccccctgctgtatctgcgccgttactgggaccat
gaacgcatggtggccgcacacatcctgcaacgcagtactgccgctggcgtgcagctgcct
gagcaggccgcacgcgagtggctggatcgcttttttcccgtggcttcgggggctggctgc
aactggcagaaagtggcctgtgcggtggccctgcgtgggcgtttttcgatcatcaccggc
ggccccggcacgggcaagacctataccgcagcacgcctgctggcgctgctgtttgctacg
gcggcgcaacctgagcagctgcgtgtggcactgtctgcgcccacgggtaaggcggcagca
cggctgaaggaatcgattgaaaccgcgctcaaggatttgcagcaagtggtgggagatgct
ctggatctggaggcgctggtgcagcgcgtgggcgctgcgcgcacgctgcactcgctgctg
ggcgcgcggcctgatacgcggcactggggctttcatgcggggcggccgctggatgtggat
gtgctcatcgtcgatgaggcatccatggtgcacctggaaatgatgtcggccctgctcgat
gcactgccgccccatgcgcgcctggtgctgctgggggacaaggaccagctggcatctgtc
gaggccggcgctgtgctgggcgatctgtgccgtgatgcgcaaatggggcgctatgacgca
gcaacggtggactatgtggcccgtgtggcgggtgagcacattcctgcaccatttcacgca
gatgccatggcgcctgcactggcgcagcagaccgtgatgctgcgcgaaagcaggcgcttc
agtgggccgattgccgagctggcgctggccgtcaatgcgggcgatgtggcgcgcagtcaa
gcgctactggccgaatgtggcgtctacgacccggtcttcatgcaagccggtggcgcggtg
cagcgcgtacaccagctggcctggcaagggcgcggcaccgccgtgggctaccagcctttt
gcacaggcgctgcagcgctgggcagcgatagaaaaagcatcggacatcgccgtgcagcat
gagggctgggtgcgcgaagtcatcaccgcgtttgagcgctttcgtctgctgtgcgccgtg
cgtgaaggcgaatggggcgtggctggcctgaacgccgccgtgcaacagctgctggcacgg
ctgggcgtgatccccaaggagcctggtgagtggtaccgcggccgacctgtcatggtcaca
cgcaacgatgcagcgctgggcgtgttcaatggtgacatcggcattgccctgcccagtgta
gcgccggggcaccctttgcgcgtgtactttctgcagggcaatcaactgcatgccgtaagc
gtggcgcgcttggtccatgtggaaaccgcgtttgccatgacggtacacaaaagccagggc
tcggagtttgagcacacggcactggtgctctctgccaaggccggctcggtgctggggcgt
gaactggtctacacaggcatcacgcgggcgcgcagtgcttttacgctgatggcagaagac
gtccgtttgctggcccaggccattgccgcgccaacacgccgggtcagtggcttgctgcgg
tttctggaaggtgaattgaaatcttga
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