Comamonas kerstersii: B5M06_04590
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Entry
B5M06_04590 CDS
T04758
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cke
Comamonas kerstersii
Pathway
cke03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B5M06_04590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cke03400
]
B5M06_04590
Enzymes [BR:
cke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B5M06_04590
DNA repair and recombination proteins [BR:
cke03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B5M06_04590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AQZ97648
UniProt:
A0A1V0BCH7
LinkDB
All DBs
Position
complement(984601..988131)
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AA seq
1176 aa
AA seq
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MAASMSTGLVALHGNCTETLADTLMAWMRTHPLQPLETEVVLVQSNGTAEWFKMRMAEQL
GVCAAAKVELPARFIWRTYRQILGKHAVPPASPLEKVPLTWRLMRLLPGLLHEPAFAPIE
SFLRPGEPERLLQLAERLADLFDQYQVYRGDWLKAWEEGRDVLTHPGKPEEPLPESQRWQ
AQLWRAVLADLQAHEMAATRTALRELVMQRLREAEPGSLPVPRRVVLFGLSHVPLAMLGF
LDAMARHTQVVLAVPNPCRYHWADAIDGRALLRMQRRRQPLRNGQDLAAIPLEAMHAHAH
PLLAAWGRQSRDYVRLLDEYDNTLQTADRAHWPRVDLFDDAPADAGSLLQQVQRSIRDML
PLAEHPKAMQPEHYIAAQDQSIVFHSAHSLVRELEVLHDQLLQLLAQSPAPGQVPLQPRD
VIVMLPDIQAAAPSIRAVFGQYSRHDPRYIPFDIADLSARAASPMVVALQWLLKLPQQRC
RLSELCDLLDVPAVAARFGLSATDVPQLTHWMAGAGIRWGLNAEQRATLGLQACGEHNSA
WFGLRRMLLGYASGSRSVQGAHGWQSAAAWGEIEPYDEVGGLGAELAGILAAVLERLMRW
WEEALLDATPDVWAQRLRQLAQDMFEPQDDVERALLDGLEKALTRWQEACDQAGFVQQIP
LAVAQEAWLQALEQPSLEQRFRAGGVTFATPMPMRAIPFEVVCLLGMNDGDYPRRATRND
FDLMQQPGQYRPGDRARRDHDRQLMLEAVLSARRVLYISWAGHHVRDNSEQPPSVLVSQL
REYLAAGWRGERKDLLAERTWHHPLQPFSRRYFEQDTELLTYAREWRDAHAQQDAAVVQD
MPALDLEALEPLSMDRLTRFVRHPAKAFFQQRLGVYFEADEDTVEDDELFQLNGLQAYQL
VEQLQQQFVADWEQSRHAALDGDRAAPLLQVRLQSLQRAGRLPLAGVGQREAQQLQATVL
PCLQEWAARRQAFPREVERLRVHFRHAGVVLEDWLDQLWAADHEVAGVAPVWLQLDARDV
LDKDGELRRDKLLRVYLRSLVAAACGVEVQGVLIGRDTALHVQPMAQDVAQQALQDLLEL
WLQGQQSPLPVPMKTGMAMAWQDEAAARTAYEGGFVGNGEAEDMYWQRLYPDFQMLNADG
RLHDLALAIYGPMEGWLQQCVENVGWIHHTEQGRHA
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
ttggctgcttccatgtccacagggctggtggccctgcacggtaattgcaccgaaacactg
gccgatacgctgatggcgtggatgcgcacccacccgctgcagccactcgaaaccgaagtc
gtgcttgtgcaaagcaatggcacggccgagtggttcaagatgcgcatggccgagcagctg
ggcgtatgcgctgcagccaaggtggagctgcccgcgcgctttatctggcgcacctaccgg
cagattctgggcaaacatgccgtgccgcctgcttcgccgctggaaaaagtgccgctgacc
tggcgactcatgcgcctgttgccgggcctgttgcacgagcccgcatttgcacccattgaa
agctttctgcgccctggcgagcccgagcgcctgctgcagctggccgagcgtctggccgac
ctgtttgaccagtaccaggtctaccgtggagattggctcaaggcctgggaggagggccgt
gatgtgctgacgcatccgggcaaaccggaggagccgctgcccgagagccagcgctggcag
gcgcagctgtggcgtgcggtgctggcggatctgcaggcgcatgaaatggccgcgacgcgt
acggccttgcgcgagctggtcatgcagcgcctgcgcgaggccgagcccggcagcctgcct
gtgccgcgccgtgtggtgctgtttggcctgagccatgtgccgctggccatgctgggtttt
ctggatgccatggcgcgccacactcaggtggtgctggccgtacccaacccctgccgctat
cactgggccgatgccattgacgggcgcgcgctgctgcgcatgcagcgccgccgccagccg
ctacgcaacggccaggacctggccgccattccgctggaggccatgcatgcccatgcccac
ccactgctggccgcatggggccgccagagccgcgactatgtgcgcctgctcgacgagtac
gacaacaccttgcagaccgccgaccgtgcacattggccacgcgtagatctgtttgatgat
gcgccggctgatgcaggcagtctgctgcagcaggtgcagcgcagcatccgagacatgctg
ccgctggctgagcaccccaaagccatgcagcctgagcactatattgctgcacaggaccag
tccatcgtctttcacagtgcgcacagtctggtgcgtgagctggaagtgctgcacgaccag
ctgctgcagctgctggcccagtcgcccgccccggggcaggtgccgctgcagccgcgcgat
gtgattgtcatgctgccggatattcaggctgcggccccatcgatccgcgccgtgtttggt
cagtacagccggcatgacccgcgctacatcccctttgatattgcagacctgagtgcgcgt
gctgccagtcccatggtggtggcgctgcaatggctgctcaagttaccccagcagcgctgc
cgcctgagcgagctgtgtgatctgctggatgtccccgccgtggccgcacgctttggtctg
tcggccaccgatgtgccgcagctcacgcattggatggcgggtgcaggtatccgctgggga
ctgaatgccgagcagcgcgccacgctgggcttgcaggcctgtggtgagcacaacagcgcc
tggtttggtctgcgccgcatgctgctcggctatgccagcggcagccgcagtgtgcaggga
gcgcatggctggcagagtgccgccgcctggggcgagattgagccctatgacgaagtcggc
gggctgggtgccgaactggcgggcattctggccgcggtgctcgagcgcctgatgcgctgg
tgggaggaagcattgctggatgccacgcccgatgtctgggcgcagcgcctgcgccagctg
gcgcaggacatgtttgagccgcaggatgatgtagagcgtgccctgctcgatgggctggaa
aaagcgctcacacgctggcaggaagcctgtgaccaggccggttttgtgcagcagattccg
ctggctgtggcgcaggaagcttggctgcaggcgctggagcagccttcgctggagcagcgt
ttccgggccggtggcgtgacctttgccacgcccatgcccatgcgggcgattccgtttgaa
gtcgtctgcctgctgggcatgaacgatggcgactacccgcgccgcgccacacgcaatgac
tttgacctgatgcagcagcccggccagtaccgtccgggtgaccgcgcgcgccgtgaccat
gaccgccagctgatgctggaggccgtgctgtctgcccgccgcgtgctctacatcagctgg
gccgggcaccacgtgcgcgacaacagcgagcagccgccttccgtgctggtgtcgcagctg
cgtgaatacctggccgctggctggcgaggggagcgcaaagacttgctggcggagcgcacc
tggcaccaccccttgcagccctttagccgccgctactttgagcaggacacggagctgctg
acctatgcccgcgaatggcgtgatgcgcatgcgcagcaggatgcggccgtggtgcaggac
atgccagcactggacctggaagcgctggagcccttgagcatggacagactgacgcgcttt
gtgcgtcacccggccaaggcgttttttcagcagcgtctgggtgtgtactttgaagcggat
gaggacacggtggaagacgacgagctgttccagctcaatggtctgcaggcctaccagctg
gtcgagcaattgcagcagcagtttgtggcggactgggagcaaagccgccatgcggcattg
gatggcgacagagctgcaccgctgctgcaggtacgcctgcagagtctgcagcgcgccggt
cgtctgccgctggccggtgtggggcagcgcgaagcgcagcagttgcaggccaccgtgctg
ccctgcctgcaggaatgggcggcacgcaggcaggccttcccacgcgaagtcgaacgcctg
cgtgtgcacttcaggcatgcgggcgtggtgctggaagactggctggatcagctgtgggca
gctgaccacgaagttgcaggtgtggcccccgtgtggctgcagctggacgcacgcgatgtg
ctggacaaggacggcgagttgcgcagggacaagctgctgcgcgtgtatttgcgcagtctg
gtggctgccgcctgtggtgtggaggtgcagggtgtgctgatcgggcgcgatacggccttg
catgtacagcccatggcgcaggacgtggcacagcaggcattgcaggatttgctggaactc
tggctgcagggccagcaatcgcccttgccagtgccgatgaagaccggcatggccatggcc
tggcaagatgaggcggcagcccgcactgcctatgagggcggctttgtggggaacggtgaa
gctgaagacatgtactggcagcgcctgtatccggacttccagatgctgaacgcagatggg
cgtctgcacgatctggcgctggctatctatgggccgatggaaggctggctgcagcagtgt
gtagaaaacgtgggctggatacaccacacagagcagggaaggcatgcatga
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