Comamonas kerstersii: B5M06_04625
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Entry
B5M06_04625 CDS
T04758
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cke
Comamonas kerstersii
Pathway
cke03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cke00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B5M06_04625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cke03021
]
B5M06_04625
03400 DNA repair and recombination proteins [BR:
cke03400
]
B5M06_04625
Enzymes [BR:
cke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B5M06_04625
Transcription machinery [BR:
cke03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B5M06_04625
DNA repair and recombination proteins [BR:
cke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B5M06_04625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AQZ97654
UniProt:
A0A0W7Z5B2
LinkDB
All DBs
Position
complement(994316..998521)
Genome browser
AA seq
1401 aa
AA seq
DB search
MKSLLDLFKQFTPDEHFDAIKIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSL
PSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFSIMSEDDYDAKCQEYGYDEFTAK
MGAEAIKELLESIDIDSEIERLRNDLTGSEVKVKKNAKRLKLLEAFKKSGIKPEWMVLEV
LPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQE
AVDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPYL
KLHQCGLPKLMALELFKPFIFAQLEQRGIATTIKAAKKEVESGTPVVWDILEEVIKEHPI
MLNRAPTLHRLGIQAFEPILIEGKALQLHPLVCAAFNADFDGDQMAVHVPLSVEAQMEAR
ALMLASNNVLFPASGEPSIVPSQDVVLGLYHATREKINGKGEGMVFLDTNEVQRALDAGE
VELHAKISVRLPEWTKNKETGEFEKSVSLVETTVGRALLSEILPKGLPFSHMNKALKKKE
ISKLINSSFRKCGLKATVVFADKLLQNGFRLSTHAGFSVSIDDMLVPPQKADILARAEAE
VKEIEQQYVSGLVTAGERYNKVVDIWGKAGDDVSKVMMDQLKVQKTIDRHGNEVDQESFN
AIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVTQDLVVTENDCGTHNGTLMRAIVEGGEVIESLRDRVL
GRTTAEDVLHPENREVLLSAGTLLTEDIIEELEAQGVDEIKVRTALTCETRYGLCAKCYG
RDLGRGGLVNLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGSIGF
NATMRYVTNTKGELVVISRSGEIIISENGRERERHKVPYGAILTIKPDEAIKAGKILANW
DPLTRPIITEYAGRVKFENVEEGLTVAKQVDDVTGLSTLVVIDPKRRGSTKVVRPQVKLV
DANDQEVKIPGTDHSVTIGFQVGALIQVRDGQEVGPGEVLARIPVEGQKTRDITGGLPRV
AELFEARTPKDKGTLAEMTGTISFGKETKGKVRLQITDLEGKVWEELVPKERNILVHEGQ
VVNKGELIVDGPADPQDILRLLGIEELSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLR
RVVVENPGDSTYIAGEQVERSEILNTNEALQAQGKIPATYSNVLLGITKASLSTDSFISA
ASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHQARKAKEAMDDAERRA
IAEAEAAEMAAATDDADDSAA
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgctactcgacctgttcaagcaattcacgccggatgagcatttcgatgccatc
aagatcggcttggcttcgcccgagaaaattcgttcctggtcttttggtgaggtgaagaag
cctgagaccatcaactaccgtacgttcaagcccgagcgcgacggcctgttctgcgccaag
atctttggtcctatcaaggactacgaatgcttgtgcggcaagtacaagcgcctgaagcac
cgtggtgtgatctgcgaaaagtgcggtgttgaagtcacgcagaccaaggtgcgccgcgag
cgcatgggtcacatcgacctggcagccccttgcgcccacatctggttcctgaagtccctg
ccttcgcgtctgggcctggtgctggacatgacactgcgcgacatcgagcgcgtgctgtac
tttgaagcctacgtggtgaccgaccccggcatgaccccgctgaagaagttcagcatcatg
tccgaggacgactacgacgccaagtgccaggaatacggctacgacgagttcaccgccaag
atgggcgcggaagcgatcaaggagctgctcgagtccatcgacatcgacagcgaaatcgag
cgcctgcgcaacgacctgactggctctgaagtcaaggtcaagaagaacgccaagcgcctg
aagctgctggaagccttcaagaagtccggtatcaagcccgagtggatggtgctggaagtg
ctgcctgtgctgcctcccgatctgcgtcctctggtgcctctggatggtggccgttttgcc
acttccgacctgaacgacctgtatcgccgcgtgatcaaccgtaactcgcgtctgcgtcgt
ctgctcgagttgaaggctcctgaaatcattgcgcgcaacgaaaagcgcatgctgcaggaa
gctgtggactcgctgctggataacggccgtcgcggcaaggccatgacgggcgctaacaag
cgtgccctgaagtcgctggccgacatgatcaagggtaagagcggtcgcttccgtcagaac
ttgctgggtaagcgcgtggactactccggtcgttccgtgattaccgtgggtccttacctg
aagctgcaccagtgcggtttgcccaagctgatggcgctggagctgttcaagcccttcatc
tttgctcagctggagcagcgtggcattgctacgaccatcaaggctgccaagaaggaagtg
gaatccggcacacctgtggtgtgggacatcctggaagaggtcatcaaagaacaccccatc
atgctcaaccgtgcgcctacgctgcaccgtttgggtatccaggcgttcgaacctatcctg
atcgaaggcaaggcactgcaactgcacccactggtctgcgcggcgttcaacgctgacttt
gacggtgaccagatggctgtgcacgttcctctgtctgtggaagcacagatggaagctcgc
gcactgatgctggcttcgaacaacgtgctgttccctgcttcgggcgaaccttccatcgtt
ccttctcaggacgtggtgctgggtctgtatcacgccacccgtgaaaagatcaacggcaag
ggcgaaggcatggtgttcctggacaccaacgaagtgcagcgcgcactggacgctggtgaa
gtggaactgcacgccaagatcagcgtgcgtctgcctgagtggaccaagaacaaggaaact
ggcgaattcgaaaagagcgtgagcctggtggaaaccaccgtgggccgtgcgctgctgtcc
gaaattctgcccaagggcctgcctttcagccacatgaacaaggcgctgaagaagaaagag
atctccaagctgatcaattcttccttccgcaagtgcggcctgaaggccaccgtggtgttc
gctgacaagctgctgcaaaacggcttccgtctgtcgacacacgcgggcttctccgtgtcc
atcgacgacatgctggtacctccacagaaggccgatatcctggctcgcgcagaagccgaa
gtgaaggaaatcgagcagcagtacgtctccggtctggtgaccgcaggtgagcgctacaac
aaggtggtggacatctggggcaaggccggtgacgacgtgtccaaggtgatgatggaccag
ctgaaggttcagaagaccattgaccgtcacggcaacgaagtggaccaggagtccttcaac
gcgatctacatgatggcggactcgggtgctcgtggttcggcagctcagattcgtcagctg
gccggtatgcgtggtctgatggccaagccagatggctcgattatcgagacacctattacc
gcgaacttccgcgaaggtctgaacgttctgcagtactttatttcgacccacggtgcccgt
aagggtctggccgacacggcgttgaagactgcgaactccggttacctgacacgtcgtctg
gtggacgtgacccaggatctggttgtgaccgaaaacgactgcggcacccacaatggcacg
ctgatgcgcgctatcgtggaaggtggtgaagtgatcgaatccctgcgcgatcgtgtgctg
ggccgcacgactgcggaagatgtgctgcaccccgaaaaccgtgaagtgctgctgtctgca
ggtaccctgctgaccgaagacatcatcgaagagctggaagctcagggcgtggacgaaatc
aaggtccgcactgcgctgacctgcgaaacccgctacggtctgtgcgccaagtgctacggc
cgtgacctgggccgcggtggtctggtgaacctgggtgaagctgtgggtgtgatcgctgcg
cagtccatcggtgaacctggtacccagctgaccatgcgtaccttccacattggtggtgcg
gcttcgcgtgcagcagtggcctccagcgtggaagccaagtccaacggttcgattggtttc
aacgccaccatgcgttatgtgaccaacaccaagggcgaactggtggtgatttcccgttcc
ggcgagatcatcatcagcgaaaacggccgcgagcgtgagcgtcacaaggtgccttacggt
gccatcctgaccatcaagcctgatgaagccatcaaggccggcaagatcctggcgaactgg
gaccctctgacccgccccatcattaccgaatacgctggtcgcgtgaagttcgagaatgtg
gaagaaggtctgaccgtggccaagcaggtggacgatgtgaccggtctgtcgaccctggtc
gtgatcgaccccaagcgtcgtggttctaccaaggtggtgcgtcctcaggtcaagctggtg
gatgccaacgaccaggaagtcaagatccctggtaccgaccactccgtgaccatcggcttc
caggtcggcgcgctgattcaggtgcgcgacggccaggaagtgggccccggcgaggtgctg
gcacgtatccctgtggaaggccagaagacccgagacattaccggtggtctgccacgtgtg
gccgaactgttcgaagcacgtacgcctaaggacaagggtacgctggccgagatgaccggt
acgatctcctttggtaaggaaaccaagggcaaggtccgcctgcagatcactgatctggaa
ggcaaggtctgggaagaactggtgcccaaggagcgcaacattctggtccacgaaggccag
gtggtgaacaagggtgagctgattgtggacggccctgccgatcctcaggacatcctgcgt
ctgctgggtatcgaagagctgtcgcgctacatcgtggacgaagtgcaggatgtgtaccgt
ctgcagggcgtgaagatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcgt
cgcgtggtggtcgagaaccccggcgactctacctacatcgctggcgagcaggtggagcgt
tccgagatcctcaacaccaacgaagcgctgcaggcccagggcaagatccccgcaacctac
tccaacgtgttgctgggtattaccaaggcttcgctgtcgaccgattcgttcatctctgcg
gcttccttccaggaaacgacccgcgtgctgaccgaagctgcgatcatgggcaagcgcgac
gagctgcgcggcctgaaggaaaacgtgatcgtgggtcgtctgatccctgccggtaccggt
ctggcataccaccaggcacgcaaggccaaggaagccatggacgacgccgagcgtcgcgcc
atcgccgaagccgaagctgctgaaatggctgccgctacggatgacgctgacgacagtgct
gcttaa
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integrated database retrieval system
