Comamonas kerstersii: B5M06_15355
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Entry
B5M06_15355 CDS
T04758
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cke
Comamonas kerstersii
Pathway
cke03030
DNA replication
cke03430
Mismatch repair
cke03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B5M06_15355
03430 Mismatch repair
B5M06_15355
03440 Homologous recombination
B5M06_15355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cke03032
]
B5M06_15355
03400 DNA repair and recombination proteins [BR:
cke03400
]
B5M06_15355
Enzymes [BR:
cke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B5M06_15355
DNA replication proteins [BR:
cke03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B5M06_15355
DNA repair and recombination proteins [BR:
cke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B5M06_15355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AQZ99421
UniProt:
A0A1V0BHQ9
LinkDB
All DBs
Position
complement(3270874..3274419)
Genome browser
AA seq
1181 aa
AA seq
DB search
MFVHLRLHTEFSVIDGTCRINDVINAAAADGQPALALTDLNNMFGALKFYKAGRGKGVKP
LLGAELNMEAWGGDVAGRVLLLVQSHQGFLNLSEILARGWTSNVPKGQAQPLFKWEWLRE
LGEGLLLLSGANAGPIGQLLLRGDSQGAADAALQLASTFPHRFYLELQRAGRPDDERLVV
QTVQLAARMNLPVVATHPIQFVKPGDFEAHETRVCIAEGEVLANPKRVRRFTQEQYFKSS
AQMEALFADIPSAIENTLEIARRCSVQLKLGTYYLPEFPIPEGMTEQQYFRHASYEGLEH
RLALLFPDVAERNRKRPEYVERLEFELGIILKMGFPGYFLIVADFINWAKNNGCPVGPGR
GSGAGSLVAYVLKITDLDPLYYNLLFERFLNPERVSMPDFDVDFCQANRDRVIDYVKERY
GRNAVSQIATFGTMAARAVIRDVGRVLDLSYNFCDGISKLIPNKPGLHVTLKYPPNPKKE
GDKYTYAIEAEPILAQRIEQEEDVKLLIEMAQKLEGLTRNIGMHAGGVVIAPGKITDFCP
MYQQPGSESAVAMFDKDDVEQIGLVKFDFLGLATLTILEIAREFIMKRHKGQENFRFEEI
PLDDYPTYKLFQEGKTEAVFQFESRGMQGMLRDAKPSRLEDLIALNALYRPGPMDLIPSF
VARKHGREEIEYPHPLVEKVLAETYGIMVYQEQVMQTAQVLGGYSLGGADLLRRAMGKKK
VEEMVKHRAIFREGAAKQGISQEKADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTAWLKV
HYTAEFYCGNMTVEMDNTDKLKVLFEDAIKMGMSFELPDVNRGVYRFEPVTDKVIRYGLG
AVKGTGQQAIEAIIAAREGQGVGPDGHVKGPFKSLFDFCSRVDRSKINKRTVEALIKAGA
FDSIHLDRAALAASIDTAFEYGNAQIVNANQGGLFDMMGDDAQGSSSQEPPLANVLPWTV
KERLTQEKQAIGFYISGHLFDEVEHEVRQFIRTPLSELGDSREPQLVAGIVSDLRVINGQ
RGKLCLFKLDDKSTVLEASIDEATLLANSDLLKDDEFVVLSARAQHDHFSGGLRLKAQKV
FSLADARCLFARYLQIDAKQQLPHVQRILREFPAKVVSDAEGDVVRGLRVRMEVRCQSGE
DAALVELDLGEHNRFYPSDAALAAWRAETGSTACQLVWRNS
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcacttgcgcttgcacaccgagttttccgtcattgatggaacgtgtcgtatc
aatgatgtcatcaacgcggctgccgctgatggccagccagcactggcgctcaccgacctg
aacaatatgttcggggccctgaagttctacaaagcagggcggggcaagggcgtgaagccc
ttgctgggggctgagctgaatatggaagcctggggcggagacgtcgcaggccgcgtactg
ctgctggtgcaaagtcatcagggctttttgaatctgtccgaaattctggcgcgtgggtgg
acaagcaatgtgcccaaggggcaggcacagcccttgttcaaatgggaatggctgcgtgag
ctgggtgaaggcctgctgctgctgtctggtgccaatgccggcccgatagggcagttgctg
ctgcgtggcgatagccagggtgcagcagatgcggccttgcagctggccagcacattcccc
caccgcttttatctggagctgcagcgtgcagggcggccagatgatgagcgtctggtggta
cagacggtgcagctggcagcacgcatgaacttgcctgtggtggcaacgcaccccatccag
tttgtcaagcctggcgactttgaagcgcacgaaacgcgagtgtgtattgccgaaggtgaa
gtgctggccaaccccaagcgggtgcgccgcttcacgcaggagcagtacttcaagagcagt
gcgcagatggaggccttgtttgccgatattccttctgccattgagaacacgctggaaatt
gcgcgtcgctgcagcgtccagctcaagctgggtacgtactacctgcctgaattccccatt
cccgaggggatgacagagcagcagtatttccgccatgcctcgtatgaggggctggaacac
cgtctggccttgctgttcccggatgtggcagagcgcaaccgcaagcggccggagtatgtg
gagcgactggagtttgagctgggcatcatcttgaagatgggctttccgggctacttcctg
atcgtggcggactttattaactgggccaagaacaatggctgccccgtggggccaggccgt
ggctctggtgcaggttcgctggtggcctatgtgctcaagattacggatctggacccgctc
tactacaacctgctgttcgaacgctttctgaacccagagcgtgtgtccatgcctgacttt
gacgtggacttctgtcaggccaaccgtgaccgcgtgattgactatgtgaaggagcgctac
ggccgcaatgccgtgagccagattgccacctttggcaccatggcggcacgggcggtgatt
cgtgacgtgggccgtgtgctggacctgagctacaacttctgtgacggcatctccaagctc
attcccaacaagccgggcctgcacgtcacgctgaagtacccgcccaaccccaagaaagag
ggcgacaagtacacctacgcgattgaggcggagcctattctggcgcagcgcattgagcag
gaagaagacgtcaagctgctcatcgagatggcgcaaaagctcgagggcctcacgcgcaac
atcggcatgcacgcgggtggtgtggtgattgcgccgggcaagatcacggacttttgcccc
atgtaccagcagccgggcagcgaatcggccgtggccatgttcgacaaggacgacgtggag
cagattggtctggtgaagttcgacttcttggggcttgccacgctgaccatcctggaaatt
gcgcgcgaattcatcatgaagcgccacaagggccaggagaacttccgctttgaagaaatt
ccgctggatgactacccgacctacaagctcttccaggagggcaagaccgaggccgtgttc
cagtttgaatcgcgcggcatgcagggcatgctgcgtgatgccaagccttcgcgcctggaa
gatctgattgccctgaacgccttgtaccgtccggggcctatggacctgattccttctttc
gtggcccgtaagcacgggcgcgaagagattgaatatccacaccctctggtggaaaaggtg
ctggcagagacctacggcatcatggtctaccaggagcaggtgatgcagaccgcccaggtg
ctcggtggctactcgctcggtggcgctgacttgctgcgccgtgccatgggcaagaaaaag
gtcgaggagatggtcaagcaccgtgccatcttccgtgagggtgcggccaagcagggcatc
agccaggaaaaggccgatgaggtctttgacctgatggaaaagttcgcgggctacggcttt
aacaagtcgcacgcggctgcttactcgctgctggcctatcacacggcatggctgaaggtg
cactacacggcagagttctactgcgggaacatgaccgtggaaatggacaacaccgacaag
ctcaaggtgctctttgaagatgccatcaagatgggcatgagctttgagctgccggatgtc
aatcgcggtgtctaccgctttgagccggtgacagacaaggtcatccgctacgggctgggt
gcggtcaagggcaccggtcagcaggcgattgaggccatcatcgctgcccgtgaagggcag
ggcgtggggccggacgggcatgtcaaggggccgttcaagagcctgtttgacttctgctcg
cgcgtagaccgcagcaagatcaacaagcgcaccgtggaagcgctgatcaaggctggcgct
tttgacagcattcacctggaccgtgctgcgctggccgcgtcgattgacacggcctttgaa
tatggcaatgcccagatcgtcaatgccaatcagggcggcctgttcgacatgatgggtgat
gatgctcaaggctccagcagccaggagccaccgctggccaatgtgctgccatggaccgtc
aaggagcgcctgacgcaggaaaagcaggccattggcttttacatctcgggccacctgttt
gatgaggtggagcacgaagtgcgccagttcatccgcacgccgctgagtgaactgggtgac
agccgtgagccacagctggtggcgggcattgtgagcgacctgcgcgtcatcaacggtcag
cgcggcaagctgtgcctgttcaagctcgatgacaagagcaccgtgctcgaagcatcgatt
gatgaagccaccttgctggccaacagcgatctgctcaaggatgacgaatttgtcgtgctc
agcgccagagcgcagcacgaccacttcagcggcggcctgcgtctgaaagcgcagaaagtc
ttcagcctggccgatgcacgctgcctgtttgcacgctatctgcaaattgacgccaagcag
cagttgcctcacgtacagcgcattctgcgtgagttcccggccaaggtggtgtcagatgcc
gaaggcgatgtagtgcgcggcctgcgcgttcgcatggaggttcgctgccaaagcggcgaa
gatgcggcattggttgagctggacctgggcgagcacaaccgcttctaccccagtgatgcg
gcactcgctgcctggcgcgcagaaactggcagcacagcctgtcagctggtctggcgcaat
agctga
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