Corynebacterium kefirresidentii: I6I12_04860
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Entry
I6I12_04860 CDS
T07267
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ckf
Corynebacterium kefirresidentii
Pathway
ckf03030
DNA replication
ckf03430
Mismatch repair
ckf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ckf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6I12_04860 (dnaE)
03430 Mismatch repair
I6I12_04860 (dnaE)
03440 Homologous recombination
I6I12_04860 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ckf03032
]
I6I12_04860 (dnaE)
03400 DNA repair and recombination proteins [BR:
ckf03400
]
I6I12_04860 (dnaE)
Enzymes [BR:
ckf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6I12_04860 (dnaE)
DNA replication proteins [BR:
ckf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6I12_04860 (dnaE)
DNA repair and recombination proteins [BR:
ckf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6I12_04860 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QQN48620
LinkDB
All DBs
Position
993314..996886
Genome browser
AA seq
1190 aa
AA seq
DB search
MAKNSSFVHLHNHTEFSMLDGMAKVDMLADEVVRQKMPAVGMTDHGNMYGSDAFYRRMTG
AGIKPIIGIEAYMAPESRFNKKRVLWGTPDQKRDDVSASGAYLHQTMIAENATGLRNLFT
LSSLASYEGQLGKWPRMDAELIAEHADGIIATTGCPSGDVQTRLRLGQFNEALEAAAMWQ
DIYGKDNFFLELMDHGLDIEKRTRDGLLEIGRKLDLPPLVTNDCHYVLESQAPAHEAMLC
VQTGKTFMDPDRFKFGGTGYYIKSAAQMRETWDDMIPDGCDNTLWIAERVQDYGEIWEEH
THDRMPIADVPEGHTPTSWLTHEVMEGLQARFPGQDVPEEYIERAKYEISVIEMKGYPSY
FLIVAELIKHARSVGIRVGPGRGSAAGALVAYALTITNIDPLEHDLLFERFLNPERPSAP
DIDIDFDDRRRGEMITYAAERWGEDKVAQVITFGTVKTKQAIKDSAKVHFGQPGFQMADR
INAALPPAIMAKDIPLRGITDPDHERYSEATEVRQMVESDPDVKKIYDTARGLEGVVRQA
GVHACAVIMASVRLMDHIPMWKRPADGAYITGWDYPACEAIGLLKMDFLGLRNLTVIGDA
IENIKRNRGEEIHLEQLHADDPKVSKVYDLLSRGDTLGVFQLDSGGMQELLKRMKPTGFK
DIVASLALYRPGPMGVNAHWDYADRKNGRKEITPIHPELEEPLKEILDETYGLIVYQEQI
MRISQKVANYTAGEADGFRKAMGKKKPEVLAQQYDKFWGGMQENGYSKSAMDALWGTIEP
FASYAFNKSHAAGYGLVSFWTAYLKAYYAPEYMAALLTSVGDKKDKSAIYLSDCRHLGIK
VLPPSVNESEEDFQAVGEDIRFGMGAIRNVGSEVVESIIKSRHDKGAFTSFGDYLDKIEL
TACTKRVTEALIKAGAFDDLNHPRKGLMLIHEDAVDAVQTTKKAADKGQFDLFAGIGGGE
DNEVANAFAMDIPEDEWDRKHELALEREMLGLYVSGHPLDGFEEALAAQTDTPLTKILND
EVRNGQELIIGGIISGVDRRFSKRDGSPWAIVTVEDHNGAQVEILVFNKVYSLVAPQIVE
DNIILARVNVKIRDERRSLFCSDIRVPDLGPGGGAGLPLRLTMRTDQCTMENIARLKQVL
LKNQGESDVYLELVDGSESTTMILGDHLRVERSGNLMGDLKATMGAGILG
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaactcctccttcgtccacctgcacaaccacaccgagttttccatgctggac
ggcatggccaaggtcgatatgctggcagacgaggtggtccgccagaaaatgccggccgta
ggcatgaccgaccacggcaatatgtacggctccgatgccttctaccgccgcatgaccggc
gccggtatcaagcccattatcggcatcgaggcgtatatggcaccggagtctcgcttcaat
aaaaagcgcgtgctgtggggcacaccggaccaaaagcgcgacgatgtttccgcttccggc
gcctacctccaccagacaatgattgcggaaaacgcgaccggcctgcgcaacctttttacc
ctgtcctcgttggcctcctatgagggccagctgggcaagtggccgcgcatggatgctgag
ctcatcgcggagcatgctgacggcatcattgccaccaccggctgtccttcgggcgatgtc
cagacccgactgcgcctaggccagttcaatgaggcgcttgaggctgcggccatgtggcaa
gacatctacggcaaagataacttctttttggagttgatggaccatgggctggacatcgaa
aagcgcacgcgcgatggcctattagagatcggccgcaagctggacctgccgccgctggtg
accaacgactgccactacgttttggaatcccaggcgccggcgcacgaggcgatgttgtgc
gtgcagaccggcaagacctttatggaccctgatcgcttcaagttcggcggcaccggctac
tacattaaatcggccgcgcagatgcgcgagacctgggacgatatgattccagatggctgc
gataacacgctgtggattgccgagcgtgtacaagactatggcgagatttgggaagagcac
acccacgatcgcatgcctattgccgacgtccccgagggccacaccccaacttcctggctc
acccacgaggttatggagggcctgcaagctcgcttccccggtcaggatgttccggaggag
tacatcgagcgcgcgaagtatgagatttccgttattgagatgaagggatacccgtcctac
ttccttatcgtggccgagctcatcaagcacgcgcgctcggtgggcattcgtgtggggcca
ggccgtggttcggcggccggcgcgcttgtcgcttacgcgctgaccattaccaatatcgac
cccctggaacatgatctcctcttcgagcgattcttgaatcccgagcgcccgtccgccccc
gatatcgatatcgacttcgatgaccgccgccgcggcgaaatgatcacctacgcggccgag
cgctggggcgaggacaaggtggcgcaggtgattaccttcggcacggtgaagacgaagcag
gccattaaagactccgccaaggtgcactttggccagcctggcttccagatggccgaccgc
atcaacgcggcgttgccacctgcgatcatggccaaggatattccgcttaggggcatcacg
gacccggatcacgagcgctattctgaggccaccgaggttcgccagatggtggaatccgac
ccggatgtgaaaaagatttatgacacggctaggggcttggaaggcgtcgtcaggcaggcg
ggcgtgcacgcctgtgcggtgattatggcctcggtccgcctcatggaccacatccccatg
tggaagcgcccggccgacggcgcctacattactggttgggactacccggcgtgtgaggcc
atcggcctgctgaagatggacttcttgggcctgcgtaacctcaccgttatcggcgatgcc
atcgaaaacatcaagcgcaaccgcggcgaagaaatccacctggagcagctgcatgccgac
gaccccaaagtctccaaggtctatgacctgctctcgcgcggcgatacgctgggcgtcttc
cagctcgactccggtggtatgcaagagctgctcaagcgcatgaagcctaccggctttaaa
gatattgtggcatcccttgcgctctaccgcccgggaccgatgggtgtgaacgcccactgg
gactatgcggaccgcaagaacggccggaaggaaatcaccccgattcacccggagctagaa
gagccgctgaaggaaatcctggatgagacctacggcctcatcgtctaccaggagcagatc
atgcgtatctcgcagaaggtcgccaactacacggccggcgaggcagatggcttccgtaag
gcgatgggtaagaaaaagcccgaagtgttggcccagcagtacgacaagttctggggcggc
atgcaagaaaacggctattcaaagtccgccatggatgcgctttggggcaccatcgagccc
ttcgcgtcctacgcgtttaataagtcccacgccgcgggctatggcctggtgtctttctgg
acggcctacctcaaggcctactacgcaccggaatacatggccgcgctgttgacctcggtg
ggcgataagaaagacaagtctgccatctacctttcggactgccgccacctgggcattaag
gtgctcccgccttccgtcaacgaatccgaagaagacttccaggcggtgggagaggatatc
cgcttcggcatgggcgctatccgcaacgtcggctcggaagtggtggaatccatcattaag
tcgcgccacgacaagggcgcgtttacctcgtttggtgactacctggacaagatcgagctg
accgcctgcactaagcgcgtaacagaagcgctcatcaaggccggtgccttcgatgacttg
aaccacccgcgcaagggtctcatgctcattcatgaagacgcggtggatgcggtgcaaacc
accaagaaggccgcggataagggccagttcgatcttttcgccggaatcggcggaggagaa
gataacgaggtcgcaaatgcctttgccatggatatcccagaagatgagtgggaccgaaaa
cacgagcttgccctcgaacgcgagatgcttggcttgtacgtgtccggccacccgctcgat
ggcttcgaagaggcgctggccgcgcaaacggataccccgctgactaagatcctcaacgat
gaggtgcgcaacggccaagagctcatcatcggtggcatcatctcgggcgtggaccgccgc
ttctccaagcgcgatggctccccatgggccattgtcacggtggaagaccacaacggcgcg
caggtggaaatcttggtattcaacaaggtctactctctcgtcgccccgcagattgtggag
gacaacatcatcttggcacgcgtgaacgtcaagattcgtgatgagcggcgttccctgttc
tgctccgatattcgcgtcccagacctcggcccgggcgggggtgcgggcctgccgctgcgc
ctgactatgcgcacggaccagtgcaccatggaaaatattgcccggctcaagcaggttctg
ctcaaaaaccagggcgagtcggacgtgtatctcgagcttgtcgacggctccgagtccacc
accatgatcctcggcgaccacctgcgcgtggaacgctccggcaacctcatgggcgatctc
aaagccactatgggcgcgggcatcttaggctga
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