Corynebacterium kefirresidentii: I6I12_08005
Help
Entry
I6I12_08005 CDS
T07267
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ckf
Corynebacterium kefirresidentii
Pathway
ckf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ckf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6I12_08005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ckf03019
]
I6I12_08005
03009 Ribosome biogenesis [BR:
ckf03009
]
I6I12_08005
Enzymes [BR:
ckf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6I12_08005
Messenger RNA biogenesis [BR:
ckf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6I12_08005
Ribosome biogenesis [BR:
ckf03009
]
Prokaryotic type
rRNA helicases
I6I12_08005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
Cas3-like_C_2
PIN_9
AAA_22
adh_short
UFL1
Motif
Other DBs
NCBI-ProteinID:
QQN47087
LinkDB
All DBs
Position
complement(1668941..1670800)
Genome browser
AA seq
619 aa
AA seq
DB search
MSITDNATGGVNEPEDFKKSESQDNSQGVTKDTRAANTSEDTGAESQDSANDNSQGFAHL
GLPEKILEAVAKVGFTKPSPIQEETIPILMEGRDVVGLAQTGTGKTAAFALPVLSQIDAK
ARHPQALVLAPTRELALQVADSFQSFAESLKGVEVLPIYGGQAYGIQLSGLRRGAQVIVG
TPGRVIDHLEKGSLDLSQLQFLVLDEADEMLNMGFQEDVERILEDTPDRKQVALFSATMP
NAIRRLSKRYLDNPAEVTVKSERRTNDNITQRFLLIPHRAKMDAFTRILEVINYDAIIVF
CRTKHETEEVAQTLRDRGFSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAARGLDV
DRITHVVNFDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSIERVTNARLEEM
DLPSVDEVNEKRKEKFAQSISNSMDNKQADFFRSLVRKYSEDNNAAMDDIAAALAVMLQG
GKNFLMEDKPLPKPKRDRRDDRKRDRDFKGGGKGRGPKRPDGDFETYRLDVGKRQNVRPG
AIVGAIANEGGLSAKDFGRITIAVGHTLVDLPKNLDPDVLKRLKDTRISGQLINIQKDTG
RPPRRDHGGGRKRGGRWRD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaccgataacgccaccggcggcgtcaacgagccggaagattttaaaaagtcg
gaatctcaggacaactcgcaaggtgtcaccaaggacaccagggctgcgaatacttctgag
gacaccggcgctgagtctcaagactcggccaacgacaattcccaggggttcgcgcatctt
ggcctgccagagaagattctggaagccgttgcgaaagtaggctttaccaagccgtccccc
attcaagaagaaaccatcccgatcttgatggaaggccgcgacgtagtcggccttgcccag
accggtaccggcaaaaccgcggccttcgcgctgccggttctgtcgcaaattgatgccaag
gcccgtcacccgcaggcacttgtgctcgcgccaacccgtgagctggccctgcaggtggca
gactccttccagtccttcgccgaatctctcaagggcgtcgaggtactgcctatctacggc
ggccaggcctacggcattcagctgtccgggctgcgtcgcggtgcgcaggtcatcgtgggt
accccaggccgcgtcatcgaccacttggagaagggctcgctggacctgtctcagctgcag
ttccttgtccttgatgaggccgatgagatgctgaacatgggcttccaggaagacgttgag
cgcatcttggaggataccccggaccgcaagcaggtggcgcttttctcggccaccatgccg
aacgctatccgtcgcctgtctaagcgctacctcgacaaccctgccgaggtcacggtgaag
tccgagcgccgcaccaatgacaacatcacgcagcgcttccttcttatcccgcatcgcgcg
aagatggatgccttcacccgcatccttgaggtcattaattatgatgccatcatcgtcttt
tgccgcacgaagcacgagaccgaagaggtagcccagaccttgcgggaccgcggttttagc
gccgccgccatcaacggtgatattgcgcaggcgcagcgcgagcgtaccgtcgatcagctc
aaggatggccgtctggacatcctcgtggctaccgatgttgccgctcgtggcctcgacgtc
gatcgcatcacccacgtggttaacttcgacattcctaacgacaccgagtcctacgtgcac
cgcatcggccgcaccggccgtgctggcaggtccggcgaggcgatcctattcgtcactcct
cgcgagcggcgcatgctgcgatccattgagcgcgttactaacgcccgattggaagagatg
gatctgccgtctgtcgacgaggtcaatgaaaagcgcaaggaaaagttcgcgcagtccatt
agcaactccatggacaataagcaggcggacttcttccgctccttggtgcgcaagtactcc
gaggacaacaacgcggccatggacgacatcgccgcagccctcgctgtcatgctgcaaggc
ggcaagaacttcctcatggaggataagccgctaccaaagcccaagcgtgatcgccgggac
gatcgtaagcgcgaccgtgatttcaagggcggcggcaagggccgtggaccgaaacgaccc
gatggggattttgagacgtaccggttggacgtcggcaagcggcagaatgtgcggcctggc
gctatcgttggcgccattgccaacgaaggtggcttgtccgctaaggacttcggccgcatc
accatcgcggtaggccacaccttggtggacctgccgaagaatttggatccagatgtgctc
aagcgcctaaaagatacgcgcatttccggccagctcatcaatattcaaaaggacaccggc
cgaccaccacgccgtgatcacggcggtggacgcaagcgcggcggacgctggcgcgactaa
DBGET
integrated database retrieval system
