Conchiformibius kuhniae: LVJ77_02065
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Entry
LVJ77_02065 CDS
T08263
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ckh
Conchiformibius kuhniae
Pathway
ckh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ckh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LVJ77_02065 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ckh03400
]
LVJ77_02065 (recB)
Enzymes [BR:
ckh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LVJ77_02065 (recB)
DNA repair and recombination proteins [BR:
ckh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LVJ77_02065 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
FAM216B
ResIII
Motif
Other DBs
NCBI-ProteinID:
UOP05098
UniProt:
A0A8T9MXC5
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All DBs
Position
complement(300785..304306)
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AA seq
1173 aa
AA seq
DB search
MAVFDPLAVPLDGTNLIEASAGTGKTWNIAALFARLVVWEQADVAEILVVTFTKAATAEL
KTRLRARLDGALSVLRRCADADFADGALAQYCAGDDFLLRLLQGGLAREGAARLMLRLQA
AVSGFDNAAVYTIHGFCQRVLQDYAFFCQVPFEIELDESGESGRQLAFAEDFWRKYVADD
ALYAELAYRRRHTPQTVLAQLRPFVPRPYLHADCADAGAYAAARREFEQCWQRDRADAEA
AFWRLHPALNGTRFRKNTFAGKFAELARNRSPYPPAPAAVRDCLYNRNGENPFAEDFVRA
NLKKNAAVPESDIAALAPLADLADAAARAADAEQQAWTALGLRLLAHVRDRRREHKKQHP
QRVFDDLLLDVAAALDADAPHAAALAQSLSRTWRFALIDEFQDTDPLQYALFRTAFADTG
TPLFLVGDPKQAIYGFRGADIFAYLQAAADAADRRYTLDTNRRNHRALNQSIDALFARTQ
PFVLPQIAYPPVRAHREHTRLTDGGAAVQVRWLNESEGETAAALEQRAAEWCAAETATLL
GGHTRIRGGHHTERPLRAGDIAVLVRRRKDGERVRRALKKRHIHSVLHSQNNIFTEAEAE
ACAALLAFFLQPQQNDVLNFILAGVLFEYPASALQALNRDETRRALWTESAQQAADDWQQ
AGIYAALQGFFARHGVETRLLAQRNERALTNLHQVMELLAAENEHCHSPASLLQWLQRRI
ADAHGGKGREEDTLRLESDDELVKIVTVHAAKGLQYPVVLCPFAWKAGGKPQGAWHIVHQ
HGTARLLPDHDADDAVREQLAREALSEDLRLLYVALTRAEERLYLYAAAYRDGGGSAPAY
LLDAADDAKHEAAYRQHWQQFAQRHALHWHGYAAPAPAAAPAPADTPAPVYRAAAFAPRR
FRFVRHTSFTGLLRQSERIAERRLAQLPAPAEHETAEAAHATPPPAAPDIHGFPHGTAAG
LCLHAVLEQNLFAADPERTRQLLQQHGFDAGLWQDTVAALLERTRRTPLLPDGTALDAFR
PDQRLTETAFVLHQNDFSPAAFRAMLDDAPDIIRRAAAALDFHSVRGYLNGTIDLLCRDR
AGRTLLVDYKSNRLGDHAAAYTPAALDAAMAEHQYCLQAVIYALAAARYLHRRGAMPPTL
HVRYLFLRGLDGTSGRGVWAWDIDTARLTAHFP
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggcggtattcgacccgctcgccgtgccgcttgacggcacgaatttgattgaggcttcg
gcaggcacgggcaaaacgtggaacatcgccgcgctgtttgcgcggctggtggtgtgggaa
caggcagatgtggcggaaattttggtggttacgtttaccaaggcggcaacggcggagctg
aaaacccgtttgcgggcgcgtttggacggggcgttgtcggtgttgcggcgttgtgcggac
gcggattttgcagacggggcgctggcgcaatattgtgcgggcgatgattttctgctgcgc
ttgttgcagggcggtttggcacgggagggggcggcgcggctgatgctgcgtttgcaggcg
gcggtgagcggttttgacaatgcggcggtgtacaccattcacggtttttgccagcgtgtg
ctgcaggattatgcgtttttctgccaagtgccgtttgagattgagttggacgagtcgggc
gaaagcgggcggcagttggcgtttgccgaagatttttggcgcaaatacgttgccgatgat
gcgctgtatgcggaattggcgtaccgccgccgccacacgccgcaaacggttttggcgcag
ttgcgtccgtttgtgccgcgcccgtatttgcacgccgattgtgccgatgcgggcgcgtat
gcggcggcgcggcgcgagtttgagcagtgttggcagcgcgaccgtgcggacgcggaagcg
gcgttttggcggctgcaccccgcgctcaacggcacccgtttccgcaaaaacacctttgcc
ggcaaattcgccgaactcgcccgcaaccgcagtccgtatccgcccgcgcccgccgccgtg
cgcgactgcttgtacaaccgcaatggcgaaaatccgtttgccgaagattttgtccgcgcc
aatctcaagaaaaacgccgccgtgccggaaagcgacatcgccgcgctcgcgcccttggcg
gatttggcagacgccgccgcccgcgccgccgatgccgaacaacaggcgtggacggcattg
ggtttgcgcctgctggcgcatgtgcgcgaccgccgccgcgaacacaaaaaacaacacccg
cagcgcgtgtttgacgatttgctgctggacgttgccgccgcactcgatgcggacgcgccg
cacgccgccgcactcgcccaaagcctgtcgcgcacttggcgtttcgcgctgattgacgaa
tttcaagacaccgaccctttgcaatacgcactgttccgcaccgcctttgccgacaccggc
acgccgctttttctggtgggcgaccccaaacaggcgatttacggctttcgcggcgcggac
atttttgcctatctgcaagccgccgccgatgccgccgaccgccgctacacgctcgacacc
aaccgccgcaaccaccgcgccctcaaccaaagcatcgatgccctgtttgcgcggacgcag
cctttcgttttgccacaaatcgcctacccgcccgtacgcgcccaccgcgaacatacccgc
ctgacggacggcggcgcggccgtacaggtgcgctggctcaacgaaagcgaaggcgaaacc
gccgccgcgctggaacaacgcgccgccgaatggtgcgccgccgaaaccgccaccctgctg
ggcggacacacccgcatacgcggcggccaccacaccgaacgccccctgcgcgccggcgac
atcgccgttttggtgcgccgccgcaaagacggcgaacgggtgcgccgcgccttgaaaaaa
cggcacattcacagcgtattgcacagccaaaacaacatctttaccgaagccgaagccgaa
gcctgcgccgcactcttggcgtttttcctgcaaccgcagcaaaacgacgttttaaacttc
atcttggcgggcgtactgtttgaataccccgcttccgccctgcaagccttgaatcgggac
gaaacccgccgcgccctgtggacggagtcggcacaacaggctgcggacgattggcaacaa
gcaggcatttacgccgccctacagggctttttcgcccgccacggcgtggaaacgcgcctg
ctggcacagcgcaacgaacgcgccctcaccaatctgcatcaggtgatggaactgctcgcc
gccgaaaacgaacactgccacagccccgcctccctgctgcaatggctgcaacggcgcatc
gccgatgcacacggcggcaaaggtcgcgaagaagacaccttgcggctggaaagcgatgac
gaattggtgaaaatcgttaccgtccacgccgccaaagggctgcaatatccggtggtgctg
tgtccgtttgcgtggaaggcgggcggcaaaccgcagggcgcgtggcacatcgtccaccaa
cacggcacagcacggctactgcccgaccacgatgccgatgatgcggtgcgcgaacaactg
gcgcgggaagcactgtcggaagacctgcgtttgctctacgttgccctgacccgcgccgaa
gaacggctgtacctgtatgccgccgcgtatcgggacggcggcggcagtgcgcccgcgtat
ctgttggacgcggcagacgatgccaaacacgaagccgcctaccgccaacattggcagcag
ttcgcccaacgccacgccctgcattggcacggatacgccgcccccgcccctgccgccgca
cccgcgcccgccgacacccccgcacccgtgtaccgcgccgccgcgtttgccccgcgccgc
ttccgcttcgtccgccacaccagcttcacggggctgttgcgccaaagcgaacgcatcgcc
gaacgccgtcttgcccaattgcccgcccccgccgaacacgaaaccgccgaagcggcacac
gcaacaccgccgcccgccgcgcccgacattcacggctttccgcacggcacggcggcaggt
ttgtgcctgcacgccgtattggaacaaaacctgtttgccgccgaccccgagcgcacccgc
caactgttgcagcagcacggttttgatgccggcctgtggcaggacaccgttgccgcactg
ctcgaacgcacccgccgcaccccgcttttgccggacggcacggcactggacgcattccgc
cccgaccaacgcctgaccgaaaccgccttcgtgctgcaccaaaacgacttcagccccgcc
gccttccgcgccatgctggacgatgcccccgacatcatccgccgcgccgccgccgcactg
gattttcacagcgtgcgcggctacctgaacggcaccatcgacctgctctgccgcgaccgt
gcgggacgcaccctgctggtcgattacaaatccaaccgcttgggcgaccatgccgccgcc
tacacccccgccgcgctcgatgcggcgatggcggaacaccaatactgcctgcaagccgtg
atttacgcccttgccgccgcccgctacctgcaccggcgcggcgcgatgccccccaccctg
cacgtgcgctacctgtttttgcgcgggctggacggcacaagcgggcgcggcgtgtgggca
tgggacatcgacacggcacggctgacggcacattttccataa
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