Conchiformibius kuhniae: LVJ77_04970
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Entry
LVJ77_04970 CDS
T08263
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
ckh
Conchiformibius kuhniae
Brite
KEGG Orthology (KO) [BR:
ckh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ckh03009
]
LVJ77_04970 (rsmB)
Enzymes [BR:
ckh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LVJ77_04970 (rsmB)
Ribosome biogenesis [BR:
ckh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LVJ77_04970 (rsmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_25
Methyltransf_31
FtsJ
Methyltransf_11
Methyltransf_12
AtzG-like
Motif
Other DBs
NCBI-ProteinID:
UOP05650
UniProt:
A0A8T9MUV4
LinkDB
All DBs
Position
903529..904788
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AA seq
419 aa
AA seq
DB search
MSLSHIQGLAADTVSAVAQGRNLSDELALLYAQHAGLPAQDRGMLHDLAHGVQRFYGSLD
FMLARLLAKSPPPRVRALLLVAMYQLQHTRNAPHAVVNEAVRHIGRIGKGRYRALGNAVL
RRFQREMPALLAACADDDVARYNLPVWWLGRLRRDYPDAWRQIADDCSAHPPFTLRVNPR
RSSVAAYLAELAADGIAATPLGGAAVMLAHALPVHKLGGFAEGRVSVQDFGAQRAAVLLA
PQDGERILDACAAPGGKSGHLLELADCRLTALDISPQRLARVADNLQRLGLTAQLHCADA
ANLPAWHDGVPFDAVLADIPCTASGTIRRNPDVRWLRRPDDAAKTAAQQIPLLDALWHTV
RPGGRMLLATCSLFREENQDQCRNFLARHPDAVLQHESILPPDTRQDGFYYALLHKSVA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctttcccatattcaaggcttggctgccgacacggtgtcggcggtggcgcagggg
cgcaatttgtctgacgaattggcgttgctgtacgcgcaacacgccggtttgccggcgcag
gacaggggcatgctgcacgatttggcacacggggtgcagcgtttttacggcagtttggat
tttatgttggcgcgtttgcttgccaaatcgccgccgccacgcgtgcgggcgctgctgctg
gtggcgatgtatcagttgcagcacacgcgcaatgcgccgcatgcggtggtcaatgaggcg
gtgcgccacatcgggcgcatcggtaaggggcgttaccgtgctttgggcaatgcggtgctg
cgccgtttccaacgggaaatgcccgcgctgcttgcggcgtgtgcggacgatgatgtggcg
cgttacaatctgcccgtgtggtggctggggcgtttgcgccgcgattatcccgatgcttgg
cggcagattgccgatgattgttcggcacatccgccgtttacgctgcgggtcaatccgcgc
cgcagcagtgttgccgcttatttggcggaattggcggcagacggcatcgccgccacgcct
ttgggcggcgcggcggtgatgttggcacacgccctgcccgttcacaaattgggcggtttt
gccgaagggcgcgtgtcggtgcaggactttggcgcacaacgcgccgccgtgctgctcgcc
ccgcaagacggcgaacgcattttggacgcttgcgccgcaccgggcggcaaaagcggacat
ctgctcgagcttgccgactgccgcctgaccgcgctggacatcagcccgcagcgtttggca
cgggttgccgacaatctgcaacggctcggcttgacggcacaactgcattgcgccgatgcc
gccaatctgcccgcatggcacgacggcgtgccgtttgacgcggtgcttgctgacattccc
tgcaccgcttccggcacgatacggcgcaaccccgacgtacgctggctgcgccgtcccgac
gacgccgccaaaaccgccgcccaacaaattcccctgctcgatgccctgtggcacaccgtc
cgtccgggcgggcgcatgctgctggcaacctgctccctgttccgcgaagaaaaccaagac
cagtgccgcaactttctcgcccgccaccccgatgccgtgctgcaacacgaaagcattctg
ccccccgatacccgtcaagacggcttttactacgccctgctgcacaaaagtgttgcgtaa
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