Conchiformibius kuhniae: LVJ77_07270
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Entry
LVJ77_07270 CDS
T08263
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ckh
Conchiformibius kuhniae
Pathway
ckh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ckh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LVJ77_07270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ckh03021
]
LVJ77_07270
03400 DNA repair and recombination proteins [BR:
ckh03400
]
LVJ77_07270
Enzymes [BR:
ckh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LVJ77_07270
Transcription machinery [BR:
ckh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LVJ77_07270
DNA repair and recombination proteins [BR:
ckh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LVJ77_07270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Ribosomal_TL5_C
Motif
Other DBs
NCBI-ProteinID:
XHH49797
UniProt:
A0ABD8B710
LinkDB
All DBs
Position
1519649..1520638
Genome browser
AA seq
329 aa
AA seq
DB search
MQNSTSEFLKPRQIDVDTLSATRAKVSMQPFERGFGHTLGNALRRILLSSMNGFAPTEVS
IEGVLHEYSTLDGVQEDVVDILLNIKGVVFRLHGRGEVTVSLNKSGAGVVRAGDIELPHD
VEIVNPDHVICHLADKGSIAMEIKVEAGRGYQPVSDRRRQHGKDHSKIGAIQLDASFSPI
SRVSFDVEMARVEQRTDLDSLILDIETNGAIDPEEAVRTAARILIDQMSIFADLQGTPVE
VEEEKAPPIDPVLLRPVDDLELTVRSANCLKAEDIYYIGDLIQRTETELLKTPNLGRKSL
NEIKEVLASKGLTLGSKLEAWPPAGLEKP
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagcacttccgaatttttgaaaccccgtcagattgatgtggataccttgtcc
gccacccgcgccaaagtgtccatgcagccgtttgagcgcggtttcggtcatactttaggt
aatgctttgcgtcgtatcttactgtcatctatgaacggctttgccccgaccgaagtgagt
atcgaaggcgtcttgcacgagtattccactttagacggcgttcaggaggatgtggttgat
attctcctgaacatcaagggcgtggtgttccgcttgcacgggcgcggcgaagtaaccgtg
tccctgaacaaatcaggcgcgggcgtggtgcgtgccggcgatatcgagctgccgcacgat
gtggagattgtcaatcccgaccacgtcatctgccatttggcggacaaaggcagcattgcc
atggaaatcaaggtggaagccggtcgcggctaccagcctgtttccgaccgccgccgccag
cacggtaaagaccacagcaaaatcggtgcgattcagttggacgcgagtttttcgcccatc
agccgtgtcagctttgacgtggaaatggcgcgtgtggagcagcgcaccgacttggacagc
ctgattctggacattgaaaccaacggtgcgattgacccggaagaagcggtgcgtaccgcc
gcgcggattttgattgaccagatgtccatctttgccgatttgcaaggcacgccggtggaa
gtggaagaagaaaaagccccgccgattgaccccgtgctgctgcgccccgttgatgatttg
gaactgaccgtgcgttcggccaactgcctgaaagccgaagacatttattacatcggcgat
ttgattcagcgcaccgaaaccgagctgctgaaaaccccgaatttgggtcgcaagtctttg
aacgaaatcaaagaagtgttggcatcaaaaggtttgacgctcggctcaaaattggaagcg
tggccgcccgccggtttggaaaagccgtaa
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