Conchiformibius kuhniae: LVJ77_08285
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Entry
LVJ77_08285 CDS
T08263
Name
(GenBank) ribonuclease catalytic domain-containing protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ckh
Conchiformibius kuhniae
Brite
KEGG Orthology (KO) [BR:
ckh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ckh03016
]
LVJ77_08285
Enzymes [BR:
ckh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LVJ77_08285
Transfer RNA biogenesis [BR:
ckh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LVJ77_08285
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
XHH50305
UniProt:
A0ABD8B8H5
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All DBs
Position
complement(1339232..1341115)
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AA seq
627 aa
AA seq
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MQIFYEEGGQFKTAAVVQKNDSTYQADTPHGKRVKIKAANVFLEFEGSGEAFLASARAEA
EGIDAALLWEVSGSDEFTAADAAAEYFGANPGKIQTAATLMALYAAPLYFHKKAKGVFKA
APADILQQALAAAERKKQLEAQINAWCADLTAGKLPEAVAAEIRTILHQPDKQSPAYKAF
AKAADELKTGLYELAKHTGAVSGLPEYLQQRFEYRYFPHGTGFAADIAAPSVPDLPDAPD
AVRAFSIDDASTTEIDDAFSLRDLGNGIMRVGVHIAAPALAVAADSPIEQVIMNRLSTVY
FPAGKITMLPESWIGAFSLDEGAARPAFSAYFDFDADFKLLAAEHRIERVFVERNLRIHA
IEPHFNSDTGTGTPDAPQFPFHAEMIWLHRLATALQKQRDRYEENTVKKYDYGIEFDEAG
KVRISRRERGSPIDTLVSEMMILANSTWAKMLDEHQLGGLFRVQPAGRVRMATRCEAHIG
MNLSHYGWFTSPLRRAADYINQKQLQSLLMPDCPPRFGANDSMLFAAVSNFDSTYTAYRD
FQNQMEGYWAMVYLQQEHIGEIRAQILKEDLVRLEGVPLVARATGIPAEIPPKSTVRLSI
TEVAPEQQFVGLRYLAPVAAADTDSPT
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttttatgaagagggcggtcagtttaaaaccgccgcagtcgtacagaaaaac
gacagcacctatcaggcagatacgccgcacggcaagcgtgtgaaaatcaaagccgccaat
gtgtttttggagtttgagggctcgggtgaggcgtttttggcatctgcccgtgccgaagcg
gaaggcattgatgccgctttgttgtgggaagtgtcgggcagcgatgaatttaccgccgcc
gatgcggccgccgaatatttcggtgccaatccgggcaaaatccaaaccgccgccaccttg
atggcactctacgctgcgccgctttatttccacaaaaaagccaaaggcgtgttcaaagcc
gcgcccgccgatattttgcaacaggcattggcggcggcggaacgcaaaaaacagctcgaa
gcgcaaatcaacgcatggtgtgccgatttgacggcaggcaaactgcccgaagccgttgcc
gccgaaatccgcaccattctgcatcagcccgacaagcaaagccccgcttacaaagccttt
gccaaagccgcagacgaattgaaaaccggtttgtacgagctggcgaaacacacgggcgcg
gtatcgggtttgcctgaatatttgcaacaacgcttcgaataccgctattttccgcacggc
acgggctttgccgcggacatcgccgcgccgtccgttcccgacctgcccgatgcgcccgat
gcggtacgcgccttttccatcgatgatgcttccaccaccgaaatcgacgatgccttcagc
ctgcgcgacttgggcaacggcatcatgcgcgtgggcgtacacattgccgcgcccgctttg
gcagtggcggcagacagccccatcgagcaggtgattatgaaccgcttgagtaccgtatat
tttccggcgggcaaaatcaccatgttgccggaaagctggattggcgcgttcagcttggac
gagggcgcggcacgtcccgccttcagtgcgtattttgattttgatgcggatttcaagctg
ttggctgccgaacaccgcatcgagcgcgtgtttgtcgagcgcaatctgcgtattcacgcc
atcgagccgcatttcaacagcgacacgggcaccggcacgcccgatgcgccgcagtttccg
tttcatgcggaaatgatttggctgcaccgtttggcaaccgccctgcaaaaacagcgcgac
cgctacgaagaaaacaccgtcaaaaaatacgattacggcatcgaatttgacgaagcgggc
aaggtacgcatcagccgccgcgaacgcggttcgccgattgacacgctggtgagcgaaatg
atgattctcgccaacagcacatgggcgaaaatgctggacgagcatcaattgggcggattg
ttccgcgtccagcctgcgggcagggtgcgcatggcgacacgctgcgaagcgcacatcggc
atgaacttgagccactacggttggtttacctcgcccctgcgccgcgctgccgactacatc
aaccaaaaacaactgcaaagcctgctgatgcccgattgcccgccgcgcttcggcgcgaac
gacagcatgctgtttgccgccgtcagcaatttcgacagtacctacaccgcctaccgcgat
tttcaaaaccaaatggaaggctattgggcgatggtgtatttgcagcaggaacacatcggc
gaaatccgcgcacagattttgaaagaagatttggtgcggctcgaaggcgtgcctttggtg
gcgcgggcaacgggcattcccgccgaaatccccccgaaaagcacggtgcggctgagcatt
accgaagttgcgcccgaacaacaatttgtcggcttgcgctatcttgcgcccgttgcggct
gccgatacggattcacccacttaa
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