Conchiformibius kuhniae: LVJ77_08715
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Entry
LVJ77_08715 CDS
T08263
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ckh
Conchiformibius kuhniae
Brite
KEGG Orthology (KO) [BR:
ckh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ckh03032
]
LVJ77_08715 (topA)
03400 DNA repair and recombination proteins [BR:
ckh03400
]
LVJ77_08715 (topA)
Enzymes [BR:
ckh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LVJ77_08715 (topA)
DNA replication proteins [BR:
ckh03032
]
Prokaryotic type
DNA Topoisomerases
LVJ77_08715 (topA)
DNA repair and recombination proteins [BR:
ckh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LVJ77_08715 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_PADR1
Ntox28
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
XHH49724
UniProt:
A0ABD8B6U0
LinkDB
All DBs
Position
complement(1258300..1260600)
Genome browser
AA seq
766 aa
AA seq
DB search
MFKNLLIVESPNKIKSVKKYLGGEFEVLASFGHVRDLIPKNGAVDPENDFAMKYQIIAKN
SKHVDAIVAAAREAEHIYLATDPDREGEAISWHIYEILKAKRGMKNISDKIRRVVFHEVT
PKGVQAALQNPRGLDINLVDAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRL
ICERENEIKAFESQEYWSVHLDSHKGRTKFSAKLHQWQGNKLEQFSLPDEAAQAAVLDAL
AGKPAAVSDVVKKKATRKPAAPYTTSTMQQDAVRKLGFTTDRTMRTAQQLFEGVDVGQGA
VGLITYMRTDSVTLSQDALTEIRHYIDNKIGADFLPKSAKVYKTKSKNAQEAHEAVRPTS
VYRSPESVKPFLSPDQFKLYQMIWQRTVACQMADAKFDATTVDISVGEGVFRATGQVLVF
EGFLKVYQEGQDEDGDDGDNGKKLPEMAVGDALPVDKLYGEQHFTQPPPRFNEATLVKAL
EEFGIGRPSTYASIIKTLKDREYVTVEQRRFQPTDTGDIVNKFLTEHFTQYVDYDFTAKL
ENQLDDIANGKRAWVPVMDKFWQGFHKQVVEKEGIERAKITTEDLDETCPKCASRLQIKF
GKRGRFIACSGYPECDYTRNLNETAEEAAKAAEEPSVVEGRDCPKCGGQLVYKQGRYGKF
IGCAHYPKCKHIEPLEPPKDTGVACPVCGKGHLIERKSRFGTPFYSCNTYPDCKYAVSHP
PLAESCPQCGWKVLTRKTTKRWGVEKVCPQKECGWKEQIEPPAPKE
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaaacctattgattgtcgaatctcccaacaaaatcaaatccgtcaaaaaatac
ttgggcggcgaatttgaagtcttggcctcattcgggcatgtgcgcgacctgattcccaaa
aacggcgcggtggaccccgaaaacgactttgcgatgaaataccaaatcatcgccaaaaac
agcaaacacgttgatgccatcgttgccgccgcccgcgaagccgaacacatctacctcgcc
accgaccccgaccgcgagggcgaagcgatttcgtggcacatctacgaaatcctcaaagcc
aaacgcggtatgaaaaacatcagcgacaaaatccgccgcgtggtgttccacgaagtcacc
ccaaaaggcgttcaggcagccctgcaaaacccgcgcggcctggacatcaatctggtggac
gcgcaacaagcccgccgcgccttggattatctggtgggtttcaatttgtcgcccctgctg
tggaaaaaaatccggcgcggcttaagcgcgggacgggtgcaaagccccgccctgcgcctg
atttgcgaacgcgaaaacgaaatcaaagccttcgaatcgcaagaatactggtcggtgcat
ctggacagccacaaagggcgtaccaaattctccgccaaactgcaccaatggcagggcaac
aaactggaacagttttccctgcccgatgaagccgcgcaagccgccgtgctggacgcgctg
gcaggcaaacccgccgccgtgtcggacgtagtcaaaaagaaagccacccgcaaacccgcc
gcgccctacaccacctccaccatgcagcaggacgcggtacgcaaactcggcttcaccacc
gaccgcaccatgcgcaccgcccaacagctttttgagggcgtggacgtggggcagggcgcg
gtcggtctgattacctatatgcgtaccgacagcgttaccctgtcgcaggacgcgctcacc
gaaatccgccactatattgataacaaaatcggcgcggacttcctgcccaaaagcgcaaaa
gtgtataaaaccaaatccaaaaacgcccaagaagcacacgaagccgtgcgccccacctcc
gtttaccgctcgcccgaaagcgtgaaaccgtttttgagtcccgaccagttcaagctctac
caaatgatttggcagcgcaccgtggcctgccagatggcggacgcgaaatttgacgccacc
accgtggacatcagcgtgggcgagggcgtgttccgcgcaacggggcaagtgctggtgttt
gaaggttttttgaaagtgtatcaggaaggtcaggacgaagacggcgatgacggggacaac
ggcaaaaagctgcctgaaatggcggtgggcgacgccctgcctgtggacaagttgtacggc
gaacagcatttcacccagccgccgccgcgtttcaacgaagccacgctggtcaaagcgttg
gaagaattcggcatcggccgcccgtccacctacgccagcatcatcaaaacgctgaaagac
cgcgaatacgttaccgttgagcaacgccgtttccagcccaccgacaccggcgacattgta
aataagtttctcaccgagcattttacccaatatgtggattacgacttcaccgccaaactg
gaaaaccagcttgacgatatcgccaacggcaaacgggcgtgggtgccggtgatggacaag
ttttggcagggctttcacaaacaggtggtggaaaaagaaggcatcgagcgtgccaaaatc
accaccgaagatttggacgaaacctgtccgaaatgcgccagccggttgcaaatcaaattc
ggcaaacgcggacgttttatcgcctgttcgggctatcccgaatgcgattacacccgcaat
ctgaacgaaaccgccgaagaagccgccaaagccgccgaagaacccagcgtggtggaaggg
cgcgattgtccgaaatgcggcgggcaattggtgtacaaacaggggcgttacggcaaattt
atcggttgcgcccattatccgaaatgcaaacacatcgagccgctcgaaccgcccaaagac
acgggcgtagcgtgtcccgtgtgcggcaaggggcatttgattgagcgcaaatcgcgtttc
ggtacgccgttttacagttgcaacacttatcccgattgcaaatacgcggtgagccacccg
cctttggcagaaagttgtccgcaatgcggctggaaagtcctcacccgcaaaaccaccaag
cgttggggcgtggagaaagtgtgtccacaaaaagaatgcggttggaaagaacagattgag
ccgcccgcgccgaaagaataa
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