Conchiformibius kuhniae: LVJ77_09975
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Entry
LVJ77_09975 CDS
T08263
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ckh
Conchiformibius kuhniae
Pathway
ckh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ckh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LVJ77_09975 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ckh03021
]
LVJ77_09975 (rho)
03019 Messenger RNA biogenesis [BR:
ckh03019
]
LVJ77_09975 (rho)
Transcription machinery [BR:
ckh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LVJ77_09975 (rho)
Messenger RNA biogenesis [BR:
ckh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LVJ77_09975 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA
S1CSD-TOTE-2
Fungal_virus_P2_C
OB_RNB
AAA_22
NACHT
Mor
Motif
Other DBs
NCBI-ProteinID:
XHH50296
UniProt:
A0ABD8B8H9
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All DBs
Position
1037390..1038646
Genome browser
AA seq
418 aa
AA seq
DB search
MHVSELQTQHITQLIEHAESIGIENANRLRKQDLVFAIVRQMMKDGVDFSCSGTLEILPD
GYGFLRSPNTSYLACPDDIYVSPNQIRRFNLHTGDTIEGTVRVPKNDERYFALVRLDSIN
GDHPEKCRHKVLFENLTPLFPTRQLKLERDIKAEENITGRVIDLISPIGLGQRALLVAPP
KSGKTVMLQNIAHAITANAPEVELIVLLIDERPEEVTEMTRSVRGEVVASTFDEPASRHV
QVAEMVIEKAKRMVEHKKDVVILLDSITRLARAYNTVVPASGKILTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSRMDDVIFEEFKGTGNMELNLERRLAEKRVFPAINI
NKSGTRREELLVSKDQLQRMWLLRKVLHPMDDIEAAEFLLDKIRKTKNNDEFFDSMKK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtttccgaactccaaacccaacacatcacccaactgattgaacacgccgaaagc
atcggcattgaaaacgccaaccgattgagaaaacaggatttggtgtttgccatcgtgcgc
cagatgatgaaagacggcgtggacttttcctgttccggcacgttggaaatcctgccggac
ggctacggctttttacgcagccccaacacttcttatttggcgtgtcccgacgatatttac
gtttcgcccaaccaaatccgccgcttcaatctgcacaccggcgacaccattgaaggcacg
gtgcgcgttcccaaaaacgacgaacgctatttcgcccttgtgcgcttggacagcatcaac
ggcgaccaccccgaaaaatgccgtcataaagtcctgtttgaaaacctcaccccgcttttc
cccacccgccagctcaaactcgagcgcgacatcaaggcggaagaaaacatcaccggccgc
gtgattgacctgatttcccccatcggcttgggacaacgcgccctgctggtcgccccgccc
aaatccggcaaaaccgtgatgctgcaaaacatcgcccacgccatcaccgccaacgccccc
gaagtggaactcatcgtcctgctgattgacgaacgccccgaagaagtaaccgaaatgacc
cgcagcgtgcgcggcgaagtggtcgcgtccacctttgacgaacccgcatcgcgccatgtg
caagtcgccgaaatggtgattgaaaaagccaagcgcatggtggaacacaaaaaagacgtg
gtgattttgctggacagcatcacccgtttggcgcgggcgtacaacaccgttgttcccgca
tcgggcaagattctcaccggcggcgtggacgccaatgccctgcaccgccccaaacgcttt
ttcggcgcggcgcggaacgtggaagaaggcggttcgctcaccatcatcgccaccgctctg
gtggacaccggcagccgcatggacgatgtgatttttgaagagtttaaaggcacgggcaat
atggagttgaatttggaacgcaggctggctgaaaagcgcgtgttccccgccatcaacatc
aacaaatccggcacacgccgcgaagaactgcttgtttccaaagaccagctccagcgcatg
tggctgttgcgtaaagtattgcacccgatggacgacattgaagcggcagagtttctgctg
gacaaaatccgcaaaaccaaaaacaacgatgagttttttgactcgatgaaaaaataa
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