Conchiformibius kuhniae: LVJ77_11715
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Entry
LVJ77_11715 CDS
T08263
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ckh
Conchiformibius kuhniae
Pathway
ckh00521
Streptomycin biosynthesis
ckh00523
Polyketide sugar unit biosynthesis
ckh00525
Acarbose and validamycin biosynthesis
ckh00541
Biosynthesis of various nucleotide sugars
ckh01100
Metabolic pathways
ckh01110
Biosynthesis of secondary metabolites
ckh01250
Biosynthesis of nucleotide sugars
Module
ckh_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ckh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LVJ77_11715 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LVJ77_11715 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LVJ77_11715 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LVJ77_11715 (rfbB)
00525 Acarbose and validamycin biosynthesis
LVJ77_11715 (rfbB)
Enzymes [BR:
ckh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LVJ77_11715 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
KR
NAD_binding_10
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
UOP04794
UniProt:
A0A8T9MUK2
LinkDB
All DBs
Position
complement(711079..712086)
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AA seq
335 aa
AA seq
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MNILITGGAGFIGSALVRFLLAHTPHRIVNVDKLTYAADPRALAACRSHPRYAFERADVC
DAAALRRVFAAYRPQAVVHLAAESHVDKAIAAPDAFVQTNINGTFVLLQTALAYWQGLPE
AARGAFRFHHVSTDEVYGDLPDDAAPLTETAAYAPSSPYAASKAAADHLVRAWRRSYGLP
VLISHSSNNYGPYQYPEKLIPRTITRALSGKALPVYGDGAQRRDWLFVEDHVRALYRVLT
EGRIGESYHIGSGREYANADTVRRICGLLDVLSPRADGASYAAQIRHVADRPGHDRRYAV
DTAKIRTELNWRPRWGFEAGLRRTVSWYVDNGIPD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttgattaccggcggggcgggttttatcggctcggcactggtgcgttttttg
ctggcgcacacgccgcaccgcattgtgaatgtcgataagctcacctatgccgccgacccc
cgtgctttggcagcgtgccgttcgcacccgcgttatgcttttgagcgggcagacgtgtgc
gatgcggcggcgttgcggcgcgtgtttgccgcctaccgtccgcaagcggtggtgcatttg
gcggcggaaagccatgtggacaaggcgattgccgcgcccgatgcgttcgtgcaaaccaac
atcaacggcacgtttgtgctgctgcaaacggcgttggcatattggcagggcttgcccgaa
gcggcgcggggcgcattccgtttccaccacgtttccaccgatgaagtgtacggcgacctg
cccgatgatgccgcacccctgaccgaaaccgccgcctatgcccccagcagcccctacgcc
gcttccaaagccgccgccgaccaccttgtccgcgcatggcggcgcagctacggactgccc
gtactcatcagccacagcagcaacaactacggtccctaccaatatcccgaaaagctgatt
ccccgcaccatcacccgcgccctgtccggcaaagccctgcccgtgtacggcgacggcgca
caacggcgcgactggctgtttgtcgaagaccacgtccgcgccctgtaccgcgtgctgacg
gaagggcgcatcggcgaaagctaccacatcggcagtggtcgcgaatatgccaatgccgac
accgtacgccgtatttgcggtctgcttgacgtattgtcgccgcgtgcggacggcgcgtcc
tatgccgcgcaaatccgccacgttgccgaccgtcccggacacgaccgccgctacgcggtg
gacaccgccaaaatccgcaccgaattaaactggcggccgcgctggggctttgaagcgggc
ttgcggcgcaccgtaagctggtacgtggacaacggcatacccgattga
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