Caldicellulosiruptor acetigenus I77R1B: Calkr_0443
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Entry
Calkr_0443 CDS
T01356
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cki
Caldicellulosiruptor acetigenus I77R1B
Pathway
cki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Calkr_0443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cki03019
]
Calkr_0443
03110 Chaperones and folding catalysts [BR:
cki03110
]
Calkr_0443
03029 Mitochondrial biogenesis [BR:
cki03029
]
Calkr_0443
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cki04147
]
Calkr_0443
Enzymes [BR:
cki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Calkr_0443
Messenger RNA biogenesis [BR:
cki03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Calkr_0443
Chaperones and folding catalysts [BR:
cki03110
]
Heat shock proteins
HSP60 / Chaperonin
Calkr_0443
Mitochondrial biogenesis [BR:
cki03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Calkr_0443
Exosome [BR:
cki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Calkr_0443
Exosomal proteins of other body fluids (saliva and urine)
Calkr_0443
Exosomal proteins of breast cancer cells
Calkr_0443
Exosomal proteins of colorectal cancer cells
Calkr_0443
Exosomal proteins of bladder cancer cells
Calkr_0443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
EAD9
Motif
Other DBs
NCBI-ProteinID:
ADQ39993
UniProt:
E4S970
LinkDB
All DBs
Position
482970..484589
Genome browser
AA seq
539 aa
AA seq
DB search
MAAKMILFDEEARRALERGVNKLADTVKVTLGPKGRNVVLEKKFGSPQIVNDGVTIAKEI
ELEDPFENMGAQIVREVASKTNDIAGDGTTTATVLAQAMIREGLKNIAAGANPMILRKGI
QKAVDVVVEEIRKMSKKVRGKEDITYVASISAGDEEIGKLVADAMEKVTNDGVITVEESK
TTETTLEIVEGMQFDRGYISAYMVTDTERMEAVLDDPYILITDKKISTIQDILPLLEQIV
QQGRKLLIIAEDVEGEALATLVVNKLRGTLQCVAVKAPGFGDRRKAMLQDIAILTGGQVI
SEELGLDLREVKLSQLGRARQVKVQKENTIIVDGAGDPSEIKARIQSIKKQIEETTSDFD
REKLQERLAKLAGGVAVIHVGAATETELKEKKLRIEDALAATKAAVEEGIVPGGGTALIN
AIPALDKLIESLTGDEKTGAMIVRKALEEPLRQIAENAGLDGSVIVNKVKESPAGVGFDA
LNERFVDMFEAGIVDPTKVTRTAIQNAASAAAMLLTTEAVVAEKPEKEKNPPAPAPDMY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaagatgatattgtttgatgaagaggcaagaagggcgcttgagcgtggtgtt
aacaaacttgcagatacagttaaggttacactcggaccaaaaggaagaaacgttgttctt
gaaaagaaatttggttcaccacagattgtaaatgacggtgttacaatcgcaaaggagatt
gagttggaagacccatttgagaacatgggtgcacagattgtaagagaggttgcatccaag
acaaacgacattgcaggtgacggtacaacaactgcaacagttctggcacaggcaatgata
agagaaggtcttaaaaacattgcagctggcgcaaacccaatgattctcagaaagggtatc
caaaaagcagttgatgttgttgtagaagagattagaaagatgagcaagaaggtaagagga
aaagaagacatcacatatgttgcttcaatctcagcaggtgacgaagagattggtaaactt
gttgcagatgcaatggaaaaggtaacaaacgatggtgtcatcactgttgaagagtcaaaa
acaacagagacaactcttgagatagttgaaggtatgcagtttgacagaggttacatctct
gcatacatggtaacagacacagagagaatggaagcagtgcttgacgacccatacatcttg
attacagacaagaaaatctcaacaatccaggacatcttgccgcttcttgaacagatagtt
cagcagggaagaaaacttttgataattgctgaagatgttgaaggcgaagcattggcaacg
cttgttgtaaacaagctcagaggaacactccagtgcgttgcggtaaaagcaccaggattt
ggtgacaggagaaaagcaatgctccaggacattgcaatactcacaggtggtcaggtaatc
tctgaagagcttggtcttgacttgagagaggtaaaactcagccagcttggtcgtgcaaga
caggtaaaggttcagaaagaaaatacaatcattgttgatggtgcaggcgacccaagcgaa
atcaaagcaagaattcagtctatcaagaagcagattgaagagacaacatccgactttgac
agagaaaaacttcaagaaagacttgcaaaacttgctggtggcgttgcagtgatccatgtt
ggtgctgcaactgagaccgagctcaaagaaaagaaactcagaattgaagatgctctggct
gcaacaaaggctgcagtagaagaaggaattgttcctggcggtggcacagcgctgattaat
gcaatcccggcacttgacaagctcattgaaagcctcactggcgatgaaaagacaggtgca
atgattgtaagaaaggcgcttgaagagccgctcagacaaatcgctgaaaacgcaggttta
gacggttcagttattgtcaacaaagtaaaagagagcccagctggtgttggatttgacgcg
ctcaacgagagatttgttgacatgttcgaggcaggtattgttgacccaacaaaggttaca
agaacagctatccaaaatgctgcatcggctgcagcaatgctcctgacaacagaagcagtt
gttgctgaaaaaccagaaaaggagaagaatccaccagctccagcacctgatatgtactaa
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