Caldicellulosiruptor acetigenus I77R1B: Calkr_0453
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Entry
Calkr_0453 CDS
T01356
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
cki
Caldicellulosiruptor acetigenus I77R1B
Brite
KEGG Orthology (KO) [BR:
cki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cki03019
]
Calkr_0453
03009 Ribosome biogenesis [BR:
cki03009
]
Calkr_0453
Messenger RNA biogenesis [BR:
cki03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Calkr_0453
Ribosome biogenesis [BR:
cki03009
]
Prokaryotic type
rRNA processing factors
Calkr_0453
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
TRAM
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ADQ40002
UniProt:
E4S979
LinkDB
All DBs
Position
493339..495054
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AA seq
571 aa
AA seq
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MQSEIIVDVSFNQTRVAVLEDKELVEIYIEREDSQSIVGNIYKGVVENILPGMDAAFVNI
GQEKNAFLYLGDVNRLEFGDTDEYYEIKTNPLALRCGQEIVVQVIKEGYDQKGPRVTTNI
TLPGRYLVLLPSTEYVGVSKRIESEEERQRLKEIACRLKPEGMGLIVRTAAEGKSEEILK
SELEFLKNMWGRIKQKSCQSAPVLLYKDYDLVFKAVRDMFTNQVDRFVINDRKKYNKIME
FLSSYAPSLKSKVEYFNLATNIFEYFQIEQKLAKALSKRVWLKSGGYIVIDETEALTVID
VNTGKYVGKTDVAETILKTNLEAAHEIARQLRLRDIGGIIIIDFIDMKNPEHQKIVLDAL
KEALKRDKTKTVVVDITPLGLVEMTRKKIRQRLSCVMQSSCPYCEGTGKILSPESVAFKV
LKEIEWYCKNKVEDKFFVEIHTKVCEILRKGEIDRIKELEQKYKKKIYVKASSNIHINKF
TICPVKDEDHYMALCGWLCEGDEVLAFVEEEDRFNPKNAVGYVNQNKIELDDASDLVGKY
IYAKVEKVYGTLSKGKILDVYEVDKEDVKEC
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtgagattatagtggatgtaagttttaaccaaacccgggttgctgttttggaa
gacaaagaacttgtcgagatttacatcgaaagggaagacagtcaaagcatagtaggaaat
atctacaaaggggttgttgaaaacatcctgcctggtatggatgcagcttttgtcaatatt
ggtcaggagaaaaacgcttttttgtaccttggagacgtgaacaggcttgagtttggtgat
accgacgagtattatgagataaaaacaaatccgcttgccctaaggtgtggtcaggaaata
gttgtgcaagtgataaaggaagggtatgaccagaaaggcccaagggttaccacaaatata
acgttgccgggaaggtacttggttctcttgccgagcacagaatatgttggcgtatcaaag
agaattgagagtgaagaagaaagacagagactcaaagagatagcatgcaggctaaaacca
gagggaatgggacttattgtcaggactgcagcagaaggcaagagcgaggagattttgaaa
agtgagcttgaatttttaaaaaatatgtgggggagaataaaacagaaaagctgccagagc
gccccagtacttctttacaaggactatgaccttgtgttcaaagctgtcagagacatgttc
accaaccaggttgacaggtttgtaataaatgataggaaaaaatataacaaaataatggaa
tttttatcatcttatgctccaagcctcaagagtaaagttgagtattttaaccttgcaaca
aatatattcgaatattttcagatagagcaaaagcttgcaaaggctctttctaaaagagtg
tggctaaaaagcggtgggtatatagtaatagacgagacagaggctttaactgtcattgac
gttaacacaggaaaatatgttggcaagacagatgttgcagagacaattttaaagacaaac
cttgaagctgcacatgagattgcaaggcagctaagactcagagacattggtggaataatt
ataatcgactttatcgacatgaaaaatccagagcatcagaaaatagttttagacgctttg
aaagaggctctcaagagagacaagacaaaaacagtggttgttgacataacgcctcttggg
cttgttgagatgacaaggaaaaagataagacaaagactttcgtgtgtgatgcagtcaagc
tgtccttactgtgagggcacaggcaagattttatctccagaaagtgttgcgtttaaggtg
ctgaaagaaattgagtggtattgcaaaaacaaggtagaagacaagttctttgttgagata
cacacaaaagtatgtgagattttgagaaagggtgaaattgacaggataaaagagcttgag
cagaagtacaaaaagaaaatctatgtaaaagcatcttcaaatattcacataaataagttt
accatatgccctgtcaaggatgaggaccattacatggcgctgtgtggttggctttgtgaa
ggagatgaagttttggcgtttgttgaggaggaagacaggttcaatccaaaaaatgcggtt
gggtatgtgaaccagaacaagatagagcttgatgatgcatctgaccttgttggcaagtac
atctatgcaaaggttgaaaaggtgtatggaacactttcaaaaggaaagattttggatgtg
tatgaggttgataaagaggatgtgaaagagtgttaa
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