Caldicellulosiruptor acetigenus I77R1B: Calkr_0499
Help
Entry
Calkr_0499 CDS
T01356
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cki
Caldicellulosiruptor acetigenus I77R1B
Brite
KEGG Orthology (KO) [BR:
cki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cki03400
]
Calkr_0499
DNA repair and recombination proteins [BR:
cki03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Calkr_0499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
AAA_16
AAA_14
AAA
GvpD_P-loop
DUF7129
AAA_22
GvpD_bR2
AAA_5
AAA_24
NTPase_1
nSTAND3
ABC_tran
A2L_zn_ribbon
ATPase_2
RecA
NACHT
RsgA_GTPase
KdpD
MCM
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ADQ40047
UniProt:
E4S9J3
LinkDB
All DBs
Position
541609..542949
Genome browser
AA seq
446 aa
AA seq
DB search
MKTKSIYVCQECGFRTSKWLGRCPNCSSWDTFVLERMDQNKKETISITKENSAVLKLSNV
STKEERFLSGIEELDGVLGGGFVKGELVLLGGEPGIGKSTLLLQVANILSERMKVLYVSG
EEGANQLKLRAQRLNIDGNFDVACETNFDVVKNIILETKPEFVIIDSIQTMYIPENQSAP
GSVTQVRDVTMQLLKIAKTYKITAVIVGHVTKDGLIAGPRVLEHMVDCVLYFEGERFNTY
RVIRAYKNRFGPTNQLGIFEMTDGGLVEVKNPSSIFLESSYNVEGVAIYSAIEGTRSILL
EIQALSTPTSFGTPRRTVTGIDYNRCVMLCAVLEKKIGLVLSTQDIYVNVAGGFKVSEPA
ADLAIVCAIASSYKGIPIGDTVLIGEVGLTGEIRAVSNIEKRLNEAKKLGFKRAIIPKRN
MESIQNDGTIEVYGMSNIEEVLNFIF
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaaaagcatttatgtttgccaggagtgcggctttagaacctcaaaatggctt
ggaagatgtccaaactgttcaagctgggacacctttgtgcttgaaagaatggaccaaaac
aaaaaagaaactatctctattacaaaagagaattcagcagtattaaaactttctaatgtc
agcacaaaagaagaaaggtttttgtctggcatagaagagctggatggcgtccttggtggc
ggatttgtaaagggagagcttgttttgcttggtggtgagccagggattggaaagtcaact
ttgcttttgcaggttgcaaatatattaagtgaaagaatgaaggttttgtatgtctcaggc
gaggaaggagcaaaccagctaaaacttcgagcacaaagactcaatatagatggaaacttt
gatgttgcgtgcgaaaccaattttgatgtagtaaaaaatattatcttagaaacaaaacca
gagtttgttataattgattctatccagacaatgtatataccagaaaaccagtcagcacct
ggaagtgtaacccaggtcagagacgtgacaatgcagcttttaaaaatcgcaaagacttat
aaaataacagctgtaattgtggggcatgtgacaaaagatggtcttattgcaggaccgagg
gttttagaacacatggttgactgtgttttgtattttgaaggagagaggtttaacacatac
agagtgataagagcttacaaaaatagatttggtcctacaaaccagcttggaatttttgag
atgacagacggtggacttgttgaggtaaaaaatccttcaagcatttttttggaaagctcc
tacaatgttgagggtgttgctatttactcagcaatagaaggaacaaggtctattctttta
gagatacaggcgcttagcactccaacatcttttggcacgccaagaaggacagtgactgga
attgattataatagatgcgtgatgctctgtgctgtgcttgaaaagaaaattggacttgta
ctgagcactcaggatatatatgtaaacgtagcaggcggatttaaggtatcagagccggca
gcagaccttgctattgtgtgtgcaatagcttcaagttataaaggaattcctattggagat
actgtattaataggtgaagtgggtttgacaggcgagattagagctgtgtctaatatagaa
aaaagattgaatgaagcaaaaaagctggggtttaaaagggctatcattccaaagagaaat
atggaatcaatccaaaatgatggtactattgaagtctatggtatgtcaaatatagaggaa
gtcttgaattttatattttag
DBGET
integrated database retrieval system
