Caldicellulosiruptor acetigenus I77R1B: Calkr_0640
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Entry
Calkr_0640 CDS
T01356
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
cki
Caldicellulosiruptor acetigenus I77R1B
Pathway
cki00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cki00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Calkr_0640
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cki01007
]
Calkr_0640
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cki03016
]
Calkr_0640
Enzymes [BR:
cki01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Calkr_0640
Amino acid related enzymes [BR:
cki01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Calkr_0640
Transfer RNA biogenesis [BR:
cki03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Calkr_0640
Prokaryotic type
Calkr_0640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF7307
NPV_P10
GAS
Mod_r
TMF_TATA_bd
Knl1_RWD_C
CENPH
ATG16
CCDC22_CC
Cauli_AT
FapA
Uds1
DUF4200
DMP19
bZIP_1
TMPIT
SKA2
DUF7365
Geminin
BLOC1_2
Sec3_CC
DUF883
Motif
Other DBs
NCBI-ProteinID:
ADQ40180
UniProt:
E4SAA3
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All DBs
Position
696307..697569
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AA seq
420 aa
AA seq
DB search
MLDLKYIRTNPEKVQEGLSKRNKDISIAPILELDEKRRKLLAEVESLKALQNQKSKEVPR
LKKEGKDVTELMNELKELSDKIKELDSRFKEVEDEIEKILLTIPNIPHESVPVGKDDTEN
VEVRRWGDVRVPDFEVKPHWEIGMSLGILDFERASKVSGSRFTFYRGLGARLERALINFM
LDLHIEKHGYTEIFPPFLVARKSMIGTGQLPKFEEDAFKTTDDYFLIPTAEVPVTNYHRE
EILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFAKPEESYDELEKL
TADAEDVLKELGLPYRVVLLCSGDLGFSSAKTYDIEVWMPSYGRYVEISSCSNFESYQAR
RANIRFRRKDGKLDYVHTLNGSGLAVGRTLAAILENFQQKDGTVVVPEVLRKYMGTDVIK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatttaaaatatataaggacaaacccagaaaaggtccaagaagggctttctaag
agaaacaaagacatttcaattgcgcccattttagagcttgatgaaaagagaagaaagctt
ttggctgaggttgaaagcctgaaagctttgcagaatcaaaaatctaaagaggttccaagg
ctcaaaaaggaaggaaaagatgtcacagagcttatgaatgagctaaaagagctatctgat
aaaattaaagaattagatagcaggttcaaagaggttgaagatgagatagaaaagatttta
ctcacaatcccaaacattcctcatgagtctgtaccggttggcaaagatgatacagaaaat
gttgaagtaaggcgctggggtgatgtaagggttcctgattttgaggtaaaaccgcactgg
gaaattgggatgagtcttggaattttggactttgaaagagcatcaaaggtgtcgggtagc
cgttttacattttacagaggacttggtgcaaggttagagagagctttaatcaacttcatg
cttgaccttcacattgaaaagcatggatataccgagatatttccaccttttttagttgcg
agaaaatctatgataggcacaggacagcttccaaaatttgaagaggatgcttttaagaca
acagatgattactttttgataccaacagcagaagttcctgttacaaattaccatagagaa
gagatactcaaagaagaagatttgccaataaaatatgttgcctactcagcatgttttagg
gcagaagctggtgctgctggcaaagacacaagagggcttatcagacagcatcaatttaac
aaggttgagcttgtgaaatttgcaaagccagaagagtcttatgatgagcttgaaaagctc
acagctgatgcagaggatgttttaaaggaattaggacttccttacagggttgtgctcctt
tgttcgggtgatttaggattttcttctgcaaagacatatgacattgaagtttggatgcca
agctatggaagatatgttgagatttcctcttgttcaaactttgaaagctatcaggcacga
agagcaaacatcagattcagaaggaaagacggaaaacttgactatgttcatacgctcaac
ggctcaggccttgctgttggcagaaccttagcagcaatacttgaaaacttccagcaaaaa
gatggaactgtagttgttccagaggttttgagaaagtatatgggtacagatgtaataaag
taa
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