Caldicellulosiruptor acetigenus I77R1B: Calkr_0780
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Entry
Calkr_0780 CDS
T01356
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cki
Caldicellulosiruptor acetigenus I77R1B
Pathway
cki03030
DNA replication
cki03430
Mismatch repair
cki03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Calkr_0780
03430 Mismatch repair
Calkr_0780
03440 Homologous recombination
Calkr_0780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cki03032
]
Calkr_0780
03400 DNA repair and recombination proteins [BR:
cki03400
]
Calkr_0780
Enzymes [BR:
cki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Calkr_0780
DNA replication proteins [BR:
cki03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Calkr_0780
DNA repair and recombination proteins [BR:
cki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Calkr_0780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Tma16
DNA_pol3_delta2
NPHP3_N
DUF3895
U3_assoc_6
Motif
Other DBs
NCBI-ProteinID:
ADQ40303
UniProt:
E4S404
LinkDB
All DBs
Position
848291..849298
Genome browser
AA seq
335 aa
AA seq
DB search
MAEKSKEIIKELNSQLLKRDFKKIYLFYGQEIFLIDEYTRRFSHAIVGGNLNNIVRFDGE
TANYNDIINEMFSISFDLEPRVLIFKNFFKYASTNSSLNLSAIIDNLKNFKSDSTYIIFK
EYEAKENKLFSALKQIAFSAELVQPSMPDLVKWVQNVMSKEGKAISENMAQEIILHYNKD
MMLIYNYLQVLISYLGKRSKVTHDDILKTLTDNPQDHIFQMLDAFATKDLESGYKYLREL
YQLKTSVSKILALILRHFKILGMLKEMQETNKKQIAKQLGILEFFVDKYKKQAETFTLDK
IKAIIQKTIEYEYMIKRGQIDDETALEMLLYQIVK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaatcaaaagagattataaaagagttaaattcgcagcttttgaaaagagat
ttcaagaagatataccttttttatggtcaagaaatatttttgattgacgaatatacgagg
cgctttagccatgccatcgtgggtgggaatttgaacaacatagtaaggtttgacggtgag
actgcaaattataacgatataataaacgaaatgttttcaatatcttttgatttagagcca
agagtgctaatcttcaaaaactttttcaagtacgcatctacaaactccagccttaatctt
tctgccatcatagataatctcaagaattttaaaagtgacagtacttatataatcttcaaa
gaatacgaagcaaaagaaaacaagttgttttccgccctcaaacaaatagcattttctgca
gaacttgtgcagccgtccatgcccgatttagtaaagtgggttcaaaatgtaatgtcaaaa
gaagggaaagcaatctctgaaaatatggcacaggagattattcttcattacaacaaggac
atgatgcttatttacaactatttacaagttctcatttcatatcttggcaaaagaagcaag
gttacgcatgatgatatattaaagaccttgaccgacaacccacaagaccatatattccag
atgcttgatgcttttgcgacaaaggatttggaaagtgggtataaatatctgagagagctg
tatcagctcaaaacaagtgtcagcaagattttggctttgattttgcgacattttaagata
cttggaatgttaaaagagatgcaggagacaaacaaaaaacagattgcaaaacagcttggc
attcttgagttctttgttgacaagtacaaaaaacaagcagaaacctttacccttgataaa
ataaaagctataattcaaaagaccatagaatacgagtacatgataaaaagagggcaaatt
gatgatgagacagcacttgaaatgcttttgtatcaaattgtaaaataa
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