Caldicellulosiruptor acetigenus I77R1B: Calkr_0813
Help
Entry
Calkr_0813 CDS
T01356
Name
(GenBank) type II secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
cki
Caldicellulosiruptor acetigenus I77R1B
Brite
KEGG Orthology (KO) [BR:
cki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cki02044
]
Calkr_0813
02035 Bacterial motility proteins [BR:
cki02035
]
Calkr_0813
Secretion system [BR:
cki02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Calkr_0813
Bacterial motility proteins [BR:
cki02035
]
Pilus system
Pilus assembly proteins
Calkr_0813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_22
FumaraseC_C
FtsK_SpoIIIE
Rad17
AAA_14
AAA_23
AAA_16
AAA
AAA_29
ABC_tran
nSTAND3
AAA_7
DUF87
cobW
AAA_33
NPHP3_N
AAA_18
DEAD
AAA_11
RNA_helicase
AAA_19
RsgA_GTPase
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ADQ40336
UniProt:
E4S499
LinkDB
All DBs
Position
879453..881168
Genome browser
AA seq
571 aa
AA seq
DB search
MLLRDRKKIGDVLVEANIITPQQLEEALKIQKETNKKLGEILVEKGIISEDELVEVLEFQ
LGIPHIKLDMYPIDPKAVEKVSETIARRHTVLPVAFDEDGSLIVAMADPLNIFAIEDLEI
YSGKRIKPRIAKASDIKRAIEKFFGKQEAMKAVEELKKETSSKEFQQSRVSVVPRFQLGL
EDGTEGPIVRLVNSIFEQAITSRASDIHIEPFEHEIKVRYRIDGVLYDIMKLDISVLSSL
VARIKIVGNMDIAEKRIPQDGRTTYIFADKIYDMRISSLPCVYGEKIVIRVIDKSAFVRS
KSELGLTVDDEEKYNKMINAPHGIILVCGPTGSGKSTTLYTILNELNTGTRNIITVEDPV
ESTIEGINQVEVNVKAGLTFAAALRSILRQDPDIIMIGEIRDKETADMAIRAAITGHLVL
STIHTNDAPSAVTRLVDMGIENFLISSSLVGVISQRLVRKLCPYCKEAYIPDEEERILLD
LDAEKDVKLYKKKGCQFCDNKGYYGRTGVYEMLLISKELRRLINKKDISSDEIKEMAIKE
GMKTLKEACKERVIMGITSVEEFLKITYALE
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgttgctcagagatagaaaaaaaataggtgatgttttggtggaggcaaatataattacc
ccccagcagttagaagaggcgttaaagatccagaaagagaccaataaaaaattgggcgaa
atattagtagaaaaaggaatcatttctgaagatgagctggttgaggttttggaatttcag
ctggggataccccacataaagcttgatatgtatccaattgacccaaaagcagttgagaag
gtatcagaaacaattgctcgaaggcatactgtattgccagttgcttttgatgaagatgga
agtttgatagttgcaatggctgatcctcttaacatatttgctatagaagatttagaaatt
tattctgggaaaagaataaaacccaggatagccaaggcttcagatataaaaagagcaata
gaaaagttttttggtaaacaggaagctatgaaggcagttgaagaattgaaaaaagagaca
agcagcaaagaattccagcaaagcagagtttctgtcgtgcccaggtttcagctggggctt
gaggatggtacagaaggtccaatagtaagattggttaattccatttttgagcaagcgatt
acttcaagagcgagcgatattcacattgaaccctttgaacatgaaataaaggttaggtat
agaatagatggagtgctgtatgatataatgaaattggatataagcgtgctttcctctctg
gttgcgagaattaagattgtaggaaatatggatattgctgaaaagagaattccgcaagat
ggtagaactacttatatatttgctgataagatatatgacatgagaatttcttctttgcca
tgcgtgtatggcgaaaagatagttataagagtaattgataaaagtgcctttgttaggtca
aagtctgagctggggttaactgttgacgatgaagaaaaatataacaagatgattaatgca
ccgcacgggataattttggtatgtggacctacaggaagtggtaaatcaaccacgttatat
acaattttgaatgagcttaatacaggaacaagaaatataataacagtggaagacccagtt
gaaagtacaattgaaggtataaaccaagtggaagttaacgtaaaggcaggtcttacattt
gcagcagctcttcgttctattttgcgtcaggatcctgacattataatgattggagagata
agagataaagagacagctgatatggcaatcagggcagctatcacaggtcacttagtttta
tctactatccataccaatgatgcgccaagtgctgtaacgagattggtagatatgggtata
gaaaactttttgataagttcatctctggttggtgtaatttcccagcgtcttgtgagaaag
ttgtgcccttattgcaaagaagcgtatatacctgacgaagaagagaggattcttcttgac
ttagatgcagaaaaggatgtaaaattatataagaagaagggttgtcagttttgcgataat
aaaggatattatgggcgaacaggtgtgtatgaaatgttgctgatatcaaaagaactgaga
aggttgattaataaaaaagatattagcagtgatgagattaaagaaatggcaatcaaagaa
ggaatgaagacactaaaagaggcatgcaaagaacgagttataatggggatcacttctgtt
gaagaatttctcaagataacatatgctttagaataa
DBGET
integrated database retrieval system
