Caldicellulosiruptor acetigenus I77R1B: Calkr_1025
Help
Entry
Calkr_1025 CDS
T01356
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
cki
Caldicellulosiruptor acetigenus I77R1B
Pathway
cki03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cki00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Calkr_1025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cki03021
]
Calkr_1025
03400 DNA repair and recombination proteins [BR:
cki03400
]
Calkr_1025
Enzymes [BR:
cki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Calkr_1025
Transcription machinery [BR:
cki03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Calkr_1025
DNA repair and recombination proteins [BR:
cki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Calkr_1025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF4162
DUF7088
NIF
YlmH_1st
Motif
Other DBs
NCBI-ProteinID:
ADQ40533
UniProt:
E4S5K9
LinkDB
All DBs
Position
1087440..1087673
Genome browser
AA seq
77 aa
AA seq
DB search
MLLRPGLDELLKYVDNKYTLSVLVAKRARQLLQQAQKKVDITNFNSDKYVTMAVNEVASG
KISYKYVKPVKKNEIKK
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgcgaccagggcttgacgagcttttaaagtatgtggacaataaatatacactt
tctgtacttgttgcaaagagggcaagacaacttcttcagcaggcgcaaaaaaaagttgac
attaccaattttaactctgacaaatatgttacaatggcagtaaatgaggttgcctctggg
aagatttcttacaaatacgtaaagccggtgaaaaagaatgagattaaaaaataa
DBGET
integrated database retrieval system
