Caldicellulosiruptor acetigenus I77R1B: Calkr_1027
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Entry
Calkr_1027 CDS
T01356
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cki
Caldicellulosiruptor acetigenus I77R1B
Pathway
cki03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Calkr_1027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cki03400
]
Calkr_1027
Enzymes [BR:
cki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Calkr_1027
DNA repair and recombination proteins [BR:
cki03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Calkr_1027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
ATPase_2
Cas3-like_C_2
PIF1
AAA_19
AAA_16
IstB_IS21
Glycos_transf_2
AAA_30
AAA_22
TK
Motif
Other DBs
NCBI-ProteinID:
ADQ40535
UniProt:
E4S5L1
LinkDB
All DBs
Position
1088901..1091075
Genome browser
AA seq
724 aa
AA seq
DB search
MIAQVCINYQDANVDKVFDYLVPPHLENSIEIGKRVYVSFGVSNRIVEGLVVGIKQTTDI
EENKLKSVLAVIDKFSIVSKEQIELALSMKNYYALNLGEALSLVIPPFVSSKQIYNICAK
KHEENRNLDDDLKKLYESILKKPVSINSKIVKQNKEKIMKLFLKGLLEFDLKNFDTNENT
EKNLPLVEPNYNLTEEQHKALNSIISAFDEGGYRNILLFGVTGSGKTEVYIRAIQYAIEK
GKSVIFMVPEISLTPQMIENVQSRIGNKVLVYHSKMKSTDRLNSWLAARNKEAVVVIGPR
SAVFAPVNNLGLIIVDEEHEPSYKSEKSPRINAVEVAQMRAKINNIPIILGSATPSIEHY
FYAKKGRYLLCTLKNRINKTLPEVLIVDMKKEILEGNKSIFSRLLLNEIENNLKKGEQVL
LFLNRRGYSPIVICRECGYVFMCKNCSISLTYHKEGYLKCHYCGYKEEYRGVCTKCNSRY
VRQYGSGTQKIEEEIKVYFKDARVLRMDSDTTSKKDATQQLLKKFREKEADILVGTQMIA
KGLHFPDLTLVGVIDADILLNMPDFRSRERTFQLLTQVAGRSGREKPGKVIIQTFNPEDY
SIVFASKHDYESFYTQEMKLRKMMEYPPYSYVVNFVVVAREQHMAKRGIEHVYAILKEYE
NESDMKIYGPSENPIFKIENQYRYHILVKFKRAGQMISIANLIKERYNYNNASLIIDVNP
LDTL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatagctcaggtttgtatcaactaccaggatgccaatgttgataaggtgtttgattat
ttggtaccaccacatcttgaaaatagcattgagatagggaaaagagtgtatgtcagcttt
ggagtttcaaatagaatagttgaaggccttgttgttggaataaagcaaactactgatata
gaggaaaataagctcaagagcgtgcttgctgtaattgataagttttcaattgtttcaaag
gaacagatagagcttgctctttcaatgaaaaattactatgcgttgaatttgggagaggct
ttgtcgcttgttatacctccttttgtgagcagcaaacagatatataatatctgtgccaaa
aagcatgaagaaaataggaacttggatgatgatttaaaaaagttgtacgaaagtattttg
aaaaaaccggtgagcataaattcaaagattgtaaaacagaacaaagaaaaaataatgaag
ctctttttgaaagggcttttggagtttgatttgaagaattttgatacgaatgaaaatact
gagaaaaatctgccgctggtagaacctaattataatttgactgaagaacagcacaaagct
ttaaatagtataatctctgcgtttgatgaaggaggatacagaaatattctcttatttgga
gtcacaggaagtggaaaaacagaggtttatataagagcgatacaatatgcaattgaaaaa
ggcaagagtgtcatatttatggtaccagaaatctcactcacaccacagatgatagaaaat
gttcaaagtagaataggcaataaggttttagtatatcacagcaaaatgaaaagtacagat
aggctaaatagttggcttgctgccagaaacaaagaagcggttgtggtaattggcccgcgt
tcggcagttttcgcccctgtcaataaccttggtcttataattgtcgatgaagagcatgaa
ccaagctacaaatccgaaaaatcgccacggataaatgctgttgaggttgcccagatgaga
gcaaagataaacaatatcccaattatattaggctctgccacaccttctattgagcactat
ttttatgccaaaaaaggaagataccttctttgtacattaaagaacagaataaacaagacc
ctgccagaagttctaattgttgatatgaaaaaagaaatcttagaaggtaacaagtccatt
tttagcaggcttttgctgaatgaaatagagaacaatttgaaaaaaggtgagcaggttctt
ctttttttaaacaggagaggttattctccaattgttatatgccgtgagtgcggttatgtt
tttatgtgtaaaaactgcagcatttcacttacataccacaaagagggatatttaaaatgt
cactattgcgggtataaagaggaatatagaggtgtgtgtacaaaatgtaacagcaggtat
gtcagacaatatggtagtggcacccagaagatagaggaagagataaaagtgtattttaaa
gatgcaagggttttgcgtatggacagtgatacaacttcaaaaaaagatgcaactcagcag
cttctaaaaaagttcagggaaaaagaggcagatattcttgtggggacgcagatgattgca
aaaggattgcactttccagacttgaccttggtgggagttatagatgcagatattcttttg
aacatgccagatttcaggagtagagaaagaacatttcaacttcttacacaggttgcagga
aggtctggcagggaaaagccaggaaaagttataattcagacttttaaccctgaagattac
agcattgtgtttgcttcaaagcacgactatgaaagcttttatactcaggagatgaaactg
agaaaaatgatggaatatccaccttattcgtacgtagtcaactttgttgttgtggcaaga
gaacagcatatggcaaaaagaggaatagaacatgtatatgctattctcaaggagtatgaa
aatgaaagtgacatgaagatttatggtccaagtgaaaatcctatctttaaaatagaaaac
cagtacaggtatcacatactagtgaagttcaaaagagctgggcagatgattagtatagca
aatctaatcaaagaaagatataattataataacgcgtcgcttatcatcgacgtaaatcct
ttggatacactttaa
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