Caldicellulosiruptor acetigenus I77R1B: Calkr_1038
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Entry
Calkr_1038 CDS
T01356
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
cki
Caldicellulosiruptor acetigenus I77R1B
Brite
KEGG Orthology (KO) [BR:
cki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cki03021
]
Calkr_1038
03009 Ribosome biogenesis [BR:
cki03009
]
Calkr_1038
Transcription machinery [BR:
cki03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Calkr_1038
Ribosome biogenesis [BR:
cki03009
]
Prokaryotic type
rRNA transcription factors
Calkr_1038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_NusA_C
KH_1
KH_2
DUF5801
Motif
Other DBs
NCBI-ProteinID:
ADQ40546
UniProt:
E4S5M2
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All DBs
Position
1100513..1101586
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AA seq
357 aa
AA seq
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MPKKEQTLDFQELFSAIDELEREYKIDRDYVYSVLESALLTAYKQVKGIKDKNLSNVKVS
IDPEKGSVKIYEYRKVVENVKDRKSEISLEDAQKIDKRYKVGDIVAIEVPISQFSRKAAM
TVRQTVIGKIREKRRSIIFENYSSKIDNIVTGVIQRIDKKNVIVEIEGGKVEAILPMEEQ
ISGEEYKPGTMMKFYITDVKIPPKEKEPIVYLSRTHPNLIKRLMENEVPEIQEGIIEIKA
IAREAGSRSKVAVYSNSLKVDPVGACIGEKGIRIQNVLKHLNGEKIDIVKWSSDIGEFIK
NALSPAEVVHIDLNLIEKKAFVLVPNSQLSLAIGKGGQNARLAAKLTGWKIDIKGKD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaaaagaacaaactttagattttcaagagctgttttcagcaattgatgagctt
gaaagggagtataagatagatagagattatgtatactcagtgttagaatcagctcttttg
acagcttataagcaggtaaaaggaataaaagacaaaaatctttctaacgttaaagtttcc
attgacccagaaaagggaagtgttaaaatttatgagtacagaaaagttgtcgaaaatgta
aaagatagaaaaagcgaaatttcactcgaggatgcacaaaaaattgataagcgatataaa
gttggggatattgtagcgatagaggttcctatttcgcagtttagtagaaaggcagcaatg
acagtcaggcagacagttatagggaagatacgagagaaaagaagaagtattatctttgaa
aactactcgtcgaaaattgacaatatagtaacgggtgttatacaaagaatagataagaaa
aacgttattgtagagattgaaggcgggaaagttgaagccatccttcctatggaagagcaa
atatctggtgaagagtacaagccaggaacaatgatgaagttttatattactgatgttaaa
attccgcctaaagaaaaagaacctattgtttatctttcaaggactcatcctaatttgata
aaaagacttatggagaatgaggtgcctgagatacaagagggtataattgaaataaaagca
attgcaagagaggcaggttcaaggtcaaaagtagcagtttattctaacagcttgaaggtt
gaccctgttggagcttgtataggtgaaaaggggatacgaattcagaatgtgctaaagcat
ttgaatggtgagaagattgacattgtaaagtggagcagtgacattggcgagtttataaaa
aacgctctcagccctgcggaggttgttcatattgatttgaatctaatcgagaaaaaggcg
tttgtccttgttccaaacagccaattgtctcttgcaattggcaagggtggacaaaacgct
cggcttgcagcaaaactaactggttggaaaatagacataaagggtaaagattga
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