Caldicellulosiruptor acetigenus I77R1B: Calkr_1043
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Entry
Calkr_1043 CDS
T01356
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cki
Caldicellulosiruptor acetigenus I77R1B
Brite
KEGG Orthology (KO) [BR:
cki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cki03016
]
Calkr_1043
Enzymes [BR:
cki01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Calkr_1043
Transfer RNA biogenesis [BR:
cki03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Calkr_1043
Prokaryotic type
Calkr_1043
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF5854
UPF0150
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ADQ40551
UniProt:
E4S5M7
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All DBs
Position
1105802..1106674
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AA seq
290 aa
AA seq
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MNGVLLVDKPVGITSHDVVEFVRKVFNVKAGHAGTLDPFATGLLVILLGEATKLSSLFTS
QEKTYIATMQFGIRTDTLDITGKIKEKNNVIVEKKEIEECFKNLKGEIELDVPIFSAKKL
RGKKLYEYARKGINIEIPKVKSIIYNIEIINFSYPYLEFKVQCSHGTYIRSLAEKIAESL
STVGLLSELRRIRSGFFDLKDAVLLSDIRAESIIPLCRLFKNEIKVGRKTYKKVLNGNPL
VNQDIEDIIDIDTAFADFYKIWVDKAVFIYKREKDVFKYILKVETADECL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagttttgcttgttgacaaaccagtaggtattacctcacatgatgttgttgaa
tttgtaagaaaagtattcaatgtaaaagctgggcatgcaggaacactcgacccgtttgca
acagggcttttggtcattttgctgggggaggctacaaagctttcttctctctttacaagc
caggaaaaaacatatatagcaacaatgcagtttggtataaggactgatacgcttgatata
actggtaaaatcaaagaaaaaaataatgtgattgttgaaaaaaaagaaatagaagaatgt
tttaaaaatttaaaaggagaaattgagcttgatgttccaattttttctgcaaagaaactg
agaggtaaaaagctctatgagtatgcacgaaaaggaataaatattgaaattccaaaggtg
aagagtatcatatataatatagagataatcaacttttcatatccgtatcttgaatttaaa
gttcagtgcagccacggaacgtatataagaagtttggctgaaaagattgcagaaagtctt
tctactgtaggtctgctttctgaactaagaaggataagaagcggtttttttgatttaaaa
gatgcagtgttacttagtgatattagggcagaaagtataattcctttgtgcaggctattt
aaaaatgagataaaagtaggcagaaaaacatataagaaggttttaaatggaaatccactt
gtaaaccaggacatagaagatattatagatattgacactgcatttgcagacttttataaa
atttgggttgataaggctgtctttatctacaaaagagaaaaggatgtattcaaatatatt
ttaaaggtggaaactgcagatgaatgtttatga
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