Caldicellulosiruptor acetigenus I77R1B: Calkr_1124
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Entry
Calkr_1124 CDS
T01356
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cki
Caldicellulosiruptor acetigenus I77R1B
Brite
KEGG Orthology (KO) [BR:
cki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cki03400
]
Calkr_1124
DNA repair and recombination proteins [BR:
cki03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Calkr_1124
Archaeal homologous recombinant proteins
Calkr_1124
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Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ADQ40632
UniProt:
E4S6L7
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All DBs
Position
1182880..1184142
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AA seq
420 aa
AA seq
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MAIKGVHTADLHFGVTTYSRETPDGLGSRVHDFFKTFDRILQFIRENGIDLLLITGDIFK
DREPNSTLRNMFYKRVVDISKEGVLVIIIPGNHDMHPFETKDHSVKVFEIFDQPNIVVMD
KPFEIKEFEIRGEKFRIVAVPYLYLERFVDETFPQKTEEFDMVAANFFEKKLNQVLDSSE
DNIPTILAGHFTVVEAQIGSERAIMLGKDIKLPLSCLLNPKLKFVALGHIHKPQILHAAN
PTVLYCGSPDRIDFSEANDSKGFVVFEIGKDSFRFEFQPVKVRPFCQLEIEVFEDQVENL
TKKLLDKIEEKIQMFEQNTSSSIQVSVVKLIIKTQSLIKEKIDIGLVERFLRDRCFVLAP
IEIEVVDSKKDFRIAEVDEKSDPVYAFEKFLSASQKYRGIKNKDKVVSEFKKLLHEVQEK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcaataaaaggtgttcatacagcagaccttcattttggtgtgacaacttacagccgc
gaaaccccagatggtcttggctcgcgtgtacatgattttttcaagacatttgacagaata
ctgcagtttatacgagaaaatggcattgaccttttgctaataacaggcgatatttttaaa
gacagggaaccaaactctacgctgaggaatatgttttacaagagggttgtggatatttca
aaagaaggtgttttggtcataataattccaggcaatcatgatatgcatccatttgagaca
aaagaccattctgtaaaggtctttgaaatatttgaccagccaaacattgttgttatggac
aaaccttttgaaatcaaagaatttgaaataagaggtgaaaagtttcgcattgtggctgtg
ccatacctttatcttgaaaggtttgtggatgagacatttcctcaaaagacagaagagttt
gatatggtagcagccaatttttttgagaagaaacttaaccaggttttggactcttcagaa
gataatattccaacaattcttgcagggcattttactgtagtagaggcgcagattggcagt
gaaagagcaatcatgcttggcaaagacataaaattgcctctttcttgccttttaaatcca
aagttaaaatttgttgcgctgggtcacattcacaaacctcaaattttgcatgcagcaaac
ccaactgtcctatattgcgggtcgcctgacaggatagatttttctgaggcaaacgacagc
aaggggtttgttgtatttgagataggcaaggacagcttcagatttgaatttcaacctgtc
aaggtaagacctttttgccagttggagattgaggtgtttgaagaccaagtagaaaatctc
accaaaaagcttcttgacaaaatagaagagaaaatacaaatgtttgagcaaaatacttca
agtagtattcaggtttcggttgtaaagctcataataaaaactcaaagtttgataaaagaa
aagattgacattgggcttgttgaaaggtttttgagagacagatgttttgttttagcgcct
atcgaaattgaggtagttgattcaaaaaaagattttagaatagctgaggttgacgagaag
tcagaccctgtttatgcctttgaaaagtttttatcggcaagccagaaatacaggggtata
aagaataaagataaggttgtatcagaatttaaaaaacttttgcatgaagttcaagaaaaa
tga
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