Caldicellulosiruptor acetigenus I77R1B: Calkr_1125
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Entry
Calkr_1125 CDS
T01356
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cki
Caldicellulosiruptor acetigenus I77R1B
Brite
KEGG Orthology (KO) [BR:
cki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cki03400
]
Calkr_1125
DNA repair and recombination proteins [BR:
cki03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Calkr_1125
Archaeal homologous recombinant proteins
Calkr_1125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
SbcC_Walker_B
AAA_21
AAA_29
AAA_27
OmpH
AAA
DUF1664
Baculo_PEP_C
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ADQ40633
UniProt:
E4S6L8
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Position
1184170..1186743
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AA seq
857 aa
AA seq
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MRPLFLRIENFKSYKDTQNEIDFSNIKVACIIGKNGNGKSSIAEAIAWALFGEFERLQTG
KRGKVAETEYINSHRDYMQVEFEFELNKTIYKVVRRLDRKGKKYLSLFVRKADSLIPINE
ATYTQTQVKLQNILGIDFNVFLHSAYLSQKRTEDFLLSSPEDRREVLAKILNLSIYDRIN
ELAKEKRKEIKVLLDVKNREIEEEHKILSEEESIKTLVADLEKKKATMEAELNGLRNELN
ALISKRSEIEQKLGLLSQKKNEMTEHQRKAEEIRYKIETARKELLKIEEKLKEEDKITAM
VKEYDGIKEKVELKRKDYETYLELKNKILLCERDIINKLEQKKIFEKNIEESNLQLNKET
SEISKYEEEMKKVEVEISKVENELDKVKQYKQEQEKKREEIVKHEKLLEVVENKLKELAS
SYRLIEANQGRCPVCLRQINGQEEKEHIKSEIAAQGREFKQRRESLTKKLEILKKEFSEL
EEKIKLEELLRAREKKFHGMLENLKAKVGQKTQNIVNLQNSIAQITQSIKLCEDEVERLK
EEITNLKREISILNFDENYYTQLLQREKELEIYQRLFSELTVNKVKAENLKKEILGYQEQ
EKEILKKVEDLSQEIASLSSFAHDMMLERVKSDILSCESKIKNLQENLNSVLKELGILEQ
KLNQIEEAKEKLSRLESEIEEMKKKIEIYDIIIDITGPDGIKNEIIANTLPQIRDEANGL
LKILTNGAFSIDFKTQRETASGKTIETLQIEISDANGTRNYELFSGGELFRINFAIRIAL
SKVLLKRAGASIRMLILDEGFGSQDEEGKDHIVECLNRIKDQFDTILVITHIEDLMDAFD
QRIVVKKDMEGSKIFVV
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
ttgagacctctttttttgaggattgaaaatttcaaatcatataaagatactcaaaacgag
attgattttagcaatataaaagttgcttgtatcataggaaaaaatggcaatgggaaatct
tctattgctgaggcaatagcctgggcgctttttggcgagtttgaaagacttcaaacaggc
aagcgtggaaaagttgcagaaacagagtatataaactcacatagggattatatgcaggtt
gaatttgaatttgagttgaataagaccatatacaaagttgtgagaaggcttgacaggaaa
ggaaaaaagtatctttcgctctttgttagaaaagcagacagcctcattcctataaatgaa
gcaacttacacccagactcaagtaaagcttcagaatattttgggaatagattttaatgtc
tttttgcactcagcctatctttctcaaaaacgaacagaagattttttgctgtcatcccct
gaagacaggcgtgaagttcttgcaaagatattgaacttgagcatatatgacaggataaac
gaacttgcgaaagaaaaacgaaaagaaataaaggttttgctggatgtaaagaacagagaa
atagaggaagaacataaaattttgtcagaggaagagtctataaaaactttggtagctgat
ttggaaaagaaaaaagccacaatggaagctgaattaaatggtttgagaaatgaactaaat
gcccttatttcaaagaggtctgaaatagaacaaaaacttggtttattgagtcagaaaaag
aatgaaatgacagaacatcagagaaaagctgaggagataaggtataagattgaaactgcc
agaaaagagcttttaaaaattgaagaaaagttaaaggaagaagataagataactgcaatg
gttaaagagtatgatggaataaaagaaaaggttgagctcaagagaaaggattatgaaacg
tatcttgaacttaagaacaaaattcttctttgtgagagggacataataaacaaactggaa
cagaaaaagatatttgaaaaaaacattgaagagagtaatttacagcttaataaagaaact
tctgagatttcaaagtatgaggaagagatgaaaaaagtggaggttgaaatttcgaaggtc
gaaaatgagctggataaagtaaagcagtataaacaggagcaagagaaaaaaagagaggag
attgtaaaacatgaaaagttgttagaggttgttgagaacaaattaaaagagcttgcttca
agttacaggctcatagaggcaaatcagggaaggtgcccagtatgcttgcgccaaattaat
ggccaggaagaaaaagagcatataaaaagtgaaattgcagcccaggggagagaatttaaa
caaagaagagaaagtttgacaaaaaaacttgaaattctgaaaaaagagttttctgagctt
gaagaaaagataaaacttgaagagcttcttcgggcaagagaaaagaagtttcacgggatg
ttagaaaatcttaaagctaaggtggggcagaaaacacaaaacattgttaatctacaaaat
tcaatagcccagataactcaaagcataaagctttgtgaagatgaagtagaaagactgaaa
gaagagataacaaacctaaagagagaaatttccattttaaactttgatgagaattactac
acccagcttttgcaaagagaaaaagaacttgaaatatatcagagactttttagcgagctt
actgtgaacaaggtgaaagctgaaaatttaaaaaaggaaatacttggatatcaagaacag
gaaaaagagattttgaaaaaggttgaagatttaagccaggagatagcaagtttatcttct
tttgcacatgatatgatgcttgaaagggtaaagtcagatattctgagctgtgaaagtaag
ataaaaaatcttcaagaaaatctcaattctgttttaaaagaattgggaatccttgaacag
aagctaaatcagattgaagaggcaaaagagaagctctcaaggcttgaaagtgaaatagaa
gagatgaaaaaaaagattgaaatatacgacataataatagatatcacaggaccagatgga
ataaaaaacgagataatcgcaaatacactgccgcagataagagatgaagcaaatgggctt
ttaaaaatactgacaaatggagcattttcaatagattttaaaacccaaagagaaacagca
tctggaaaaacaattgaaactcttcaaatagaaatttctgatgcaaacggtacaagaaac
tatgagcttttttcgggaggagagcttttcagaataaattttgctatcagaattgctctt
tcaaaggtacttctcaaaagagcaggtgcttctatcaggatgctgattttagacgaaggt
tttggctctcaggatgaagaggggaaggaccacattgttgagtgtctgaatagaatcaaa
gaccagtttgacactatacttgttataacccacattgaggatttaatggatgcatttgac
cagcgaattgttgttaaaaaagatatggaagggtctaaaatttttgttgtataa
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