Caldicellulosiruptor acetigenus I77R1B: Calkr_1243
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Entry
Calkr_1243 CDS
T01356
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cki
Caldicellulosiruptor acetigenus I77R1B
Pathway
cki03030
DNA replication
cki03430
Mismatch repair
cki03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Calkr_1243
03430 Mismatch repair
Calkr_1243
03440 Homologous recombination
Calkr_1243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cki03032
]
Calkr_1243
03400 DNA repair and recombination proteins [BR:
cki03400
]
Calkr_1243
Enzymes [BR:
cki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Calkr_1243
DNA replication proteins [BR:
cki03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Calkr_1243
DNA repair and recombination proteins [BR:
cki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Calkr_1243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
MCM10_OB
At5g48480-like_N
Motif
Other DBs
NCBI-ProteinID:
ADQ40751
UniProt:
E4S787
LinkDB
All DBs
Position
1297248..1300670
Genome browser
AA seq
1140 aa
AA seq
DB search
MSFVHLHLHTEYSLLDGACRIDRLFERVKELNMNAVAITDHGVMYGVIDFYKAAKENGIK
PIIGCEVYLAPRTRFDKEPNIDNDIHHLVLLAMDNEGYKNLSKIVSIGFVEGFYYKPRVD
REVLSKYSKGLVALTSCLAGEIPKLILREQKEKLYDAISFYKEVFGENFYFELQYHYIDE
QRFVNNELMRLSKKYQIPLVATNDVHYLRREDRNLHDILLCIQTGKTISDSNRMEFPTDE
FYLKSPEEMQQIFGYIPEALKNTLEIAEKCNVEFEFGKINLPKFQLPEGKSDAFEYLKEL
ALEGFKKRYSKDDKAAYDRLMMELQVIKDMGFVEYFLIVRDFINYAKQNNIMVGPGRGSA
AGSIVAYCLGITNVDPIKYDLLFERFLNPERVSMPDIDIDFCYQRRQEVIDYVTRKYGED
RVSQIITFGTMAARASIRDVGRVLGIPYSQVDEIAKMIPFSPGMTIDKALEINHELKKIY
EQNDTVRKIIDTARNLEGMPRHASVHAAGVVISSCPITDLVPLARTDDAIVTQFPMTTLE
ELGLLKMDFLGLRTLTVIQNTLELVKKNRGIEIDLDRIDYNDKNVYEFISEGNTNGVFQL
ESSGMKQFMKELKPENLEDIIAGISLFRPGPMDQIPVYIQNKNNREKIEYLHPSLEPILN
VTYGCIVYQEQVMQIFRTLAGYSLGRADLVRRAMAKKKADILMEEKDRFIEGAMANGVEK
ETAEKIFAIIEDFASYAFNKSHAAAYAILAYQTAYLKKYYTIEFMTSLITSVMNSNEKVG
MYIEECRKFGISILPPDINKSSYDFTIEGNSIRFGLRAIKSLGENVIAHILKEREVKGEF
KDLYDFIMRVDTNTVNKRIIENLIRSGAFDFTGINRNSLLASVEDILVLKQAKKKNANQF
SFFEISGNENESFEYKNMPQPTAQELMKMEKDTIGIYISSHPLERYTEEISKYNVTPLSE
ISTMSEEDEYKFEQILVCGILKEVKVKLTKNNQTMAFAKLEDLTDSVEVLFFPSVYEKYS
HLIKEDMIVLIEAKATFREDEGVKVIAQKVDRLGNNKHQENQGNGEKAIAIRVSDDTILK
SKKFLAFVKFFAGKSKIVLYYNQKRLISKSNLCIEINPTVIEQLKEWFGEENVWIEDIDS
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgttcatcttcaccttcataccgagtatagtttgttggacggggcttgtagg
attgataggctttttgaaagagtaaaagagctaaatatgaatgctgtggcaataactgac
catggagtaatgtatggtgttatagatttttataaagctgccaaggaaaatggtatcaaa
cctataattggatgtgaggtatatttagctccacggactcgctttgataaagaaccaaat
atcgataatgatatccaccaccttgtccttcttgctatggacaatgagggttataaaaat
ctttccaaaatagtttcgattggatttgttgaaggattttactataaaccaagggttgac
agagaagtcttgagcaagtattcaaaagggcttgtggcacttacaagttgtcttgcgggg
gagattcccaagctgattttgagagagcaaaaggaaaaactgtatgatgcaattagtttt
tataaagaggtgtttggagagaacttttactttgaacttcaatatcattacattgatgag
caaagatttgtaaataatgaacttatgaggctatcaaaaaaatatcaaattccgcttgtg
gcaacaaatgatgttcattatttgaggagagaagatagaaaccttcatgatatcttgctt
tgtattcagacaggaaaaaccataagtgattctaacagaatggaatttccaaccgatgaa
ttttatctcaagtcacctgaagagatgcaacagatttttggttacattccggaagcactg
aaaaacacgttggagattgctgaaaaatgcaacgttgagtttgagtttggtaagattaac
cttccgaaatttcaactgccagaaggcaaaagtgacgcatttgaataccttaaagagttg
gctttagaaggattcaagaaaagatattcaaaagatgacaaagctgcatatgacaggctt
atgatggagcttcaagtgataaaagatatgggatttgtcgaatattttttaatagttcgg
gactttataaactatgctaaacaaaacaacataatggtaggtcctggaagaggttctgca
gctgggagtattgttgcatactgtctgggtattacaaatgttgacccaataaagtatgac
cttctttttgagagatttttaaatccagaaagagtctctatgcccgacatagacatcgac
ttttgttatcaaagacgacaggaagtgattgactatgtcactcgcaaatatggagaggac
agagtaagtcagataataacatttgggacaatggcagcaagggcttcaatcagagatgtt
ggaagggtcctgggaattccatattctcaggtggacgaaattgcaaaaatgattccgttt
tctcctgggatgaccattgacaaggcacttgagataaaccatgagcttaaaaagatttat
gaacaaaatgatacggtaagaaaaataattgatacagcaagaaatcttgaaggtatgcca
agacatgcatctgttcatgctgccggtgttgtgatttcaagctgtccaattacagatttg
gtgccgttggcaaggactgatgatgctattgtcactcaatttccaatgacaactttagaa
gaacttggtcttttgaagatggattttcttggtttgagaacactcactgtcatccaaaat
acgttggagcttgtgaaaaaaaatagaggtattgagattgatttagacaggatagactat
aatgacaaaaatgtttatgaatttatatcagaaggaaacacgaatggtgtgttccagctt
gaaagtagtggcatgaaacagtttatgaaagaactcaaacctgaaaacttggaggatatt
attgcaggaatatctttatttaggcctggaccaatggaccagattccagtttatatccag
aacaagaataacagagaaaaaattgaatacctccatcccagccttgaaccaattttaaat
gtcacctatggatgtattgtgtatcaagaacaagttatgcaaattttccgaacacttgct
gggtactcgcttggaagagctgaccttgtgagaagagcaatggcaaagaaaaaagccgat
atactgatggaagaaaaggacagattcattgaaggagctatggcaaatggagtggaaaaa
gaaacagctgaaaagatttttgccattatagaagattttgcaagttatgcatttaacaaa
tcacatgctgctgcatatgctatattagcatatcagactgcatatttgaaaaagtattat
accatagagtttatgacaagtttaattacaagtgttatgaactcgaatgagaaggttgga
atgtatatagaagagtgcaggaaatttggaatatctattttgccacctgatataaacaaa
agtagttatgactttacaatcgaaggaaatagtataagatttggcctgagagctataaaa
agcttgggagagaacgtcattgcccacatcttaaaagagagagaggtaaaaggtgaattt
aaggatttgtatgattttataatgagagttgacacaaatactgtaaacaaaagaataatt
gaaaatttgatacgctcgggtgcatttgactttacagggatcaacagaaattcgctttta
gcttcagtagaagatattcttgtgctaaaacaagctaaaaagaagaatgcaaatcagttt
agtttttttgagatatccggcaacgaaaatgaaagttttgagtacaaaaatatgccacaa
ccaactgctcaggaactcatgaaaatggaaaaggatactattggaatatatataagcagt
catccacttgaaaggtatacagaggaaatttcaaaatacaatgtaactcctctttctgaa
atatctactatgtccgaagaagatgaatacaagtttgagcaaatacttgtgtgcgggata
ttaaaagaggtaaaagtaaaacttacaaagaacaaccagacaatggcatttgcaaagtta
gaagatttgacagattcggttgaggtgttgtttttcccgagcgtttatgaaaagtattct
catctaataaaagaagatatgattgtattaattgaggcaaaggcaactttcagagaggac
gagggggtaaaagttattgctcaaaaagtagataggcttggcaataacaaacatcaagaa
aatcaaggcaatggagaaaaagccattgcaataagggtaagtgatgatacaatattaaag
tcaaagaaattcttagcgtttgtaaagttctttgcaggaaagtctaaaatagttctttat
tataatcaaaagaggctaatttccaagtcaaatttgtgtatagaaataaatcctacggtg
attgaacagctcaaggaatggtttggcgaggaaaatgtttggatagaagatatagattct
tga
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