Caldicellulosiruptor acetigenus I77R1B: Calkr_1396
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Entry
Calkr_1396 CDS
T01356
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
cki
Caldicellulosiruptor acetigenus I77R1B
Pathway
cki03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Calkr_1396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cki03400
]
Calkr_1396
DNA repair and recombination proteins [BR:
cki03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Calkr_1396
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Calkr_1396
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
NRDD
Motif
Other DBs
NCBI-ProteinID:
ADQ40898
UniProt:
E4S8C5
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All DBs
Position
complement(1451246..1451980)
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AA seq
244 aa
AA seq
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MKLIKTKGIVLKETNFEESSKILTVLTSDFGKIQVLSKNCRRLLSVLSAVSQPLMFCEFV
IRKTKDIYSISSASVIESFFELSQDVNLAIYSGYLIELVDSFLEFEQKNEDVLRLLLNSL
YLLKKGKDPEVVSRIFEIKILVYTGFFPQFTQCVKCQRKDITRAFFSFKNGGLTCEACKE
DNDIEIEIEVVKRILIVAATNLKKLNKISFDSSLNSKIKTITLPYIKMVLQKDIKILDFF
RFIQ
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaataaaaactaaaggaattgtgctaaaagagacaaactttgaagagtcgagt
aagattttgactgtgctcacaagcgactttgggaaaattcaagttttatcgaaaaattgt
agaaggctattgagtgtactttctgctgtatctcagccgcttatgttctgtgagtttgtt
ataagaaaaacaaaagatatttactcaatttcttcagcatctgtgattgaatcatttttt
gaactatctcaagatgtaaatcttgcaatttattcgggatatcttattgaacttgttgac
agtttcttggaatttgaacaaaaaaatgaggatgttttaaggcttcttttaaactctctt
tatcttctgaaaaaaggaaaagaccctgaagtggtcagcaggatatttgaaataaaaatt
ttagtatatacaggctttttccctcagtttacccagtgtgtaaagtgtcagagaaaggac
attacaagagccttcttttctttcaaaaacggtggtcttacttgcgaagcttgcaaagaa
gataatgatatagagatcgagattgaagttgtaaagcgtattttaattgttgcagcaacc
aatttgaaaaagctcaacaagatttcgtttgacagctctttaaacagcaagataaagacc
ataacgctaccatatattaaaatggtgctgcaaaaagatatcaaaattcttgattttttt
aggtttatacaataa
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