Caldicellulosiruptor acetigenus I77R1B: Calkr_1423
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Entry
Calkr_1423 CDS
T01356
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
cki
Caldicellulosiruptor acetigenus I77R1B
Pathway
cki03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Calkr_1423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cki03400
]
Calkr_1423
DNA repair and recombination proteins [BR:
cki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Calkr_1423
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Calkr_1423
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Microtub_bd
Kinesin
Flavi_DEAD
UvrD-helicase
DUF87
Motif
Other DBs
NCBI-ProteinID:
ADQ40925
UniProt:
E4S8S8
LinkDB
All DBs
Position
complement(1475785..1477770)
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AA seq
661 aa
AA seq
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MKKFKLVSDFKPTGDQPKAIEMLTEGILKGEKFQTLLGVTGSGKTFTMAKVIENVQRPTL
VLAHNKTLAAQLCSEFREFFPENAVEFFVSYYDYYQPEAYIPETDTYIEKDSSINEEIDK
LRHSATSALFERRDVIIVASVSCIYSLGSPEDYLNLTISLRLGMIKDRDEVIRELIRMQY
ERNDIDFRRGRFRVRGDVLEVFPASNTDRAIRIEFFGDEIERITEFDVVTGEVIGRRNHV
AIFPASHYVTTAEKLKRAIKSIEEELEQRLKELRSMGKLVEAQRLEQRTRYDIEMLQEMG
FCKGIENYSRHLTGRSPGSPPYTLLDYFPKDFIMFIDESHVTIPQVRAMYNGDKARKDTL
VEYGFRLPSAYDNRPLTFEEFEEKLNQVIFVSATPGPYELKKSSRIVEQIIRPTGLVDPE
IEVHPVQGQIDHLIGEIRKRVEKNQRVLVTTLTKKMAESLTEYLKDVGIRVRYMHSDIDT
IERMQIIRDLRLGKFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQTIGRA
ARNVDGKVIMYADRITNAMQRAIDETNRRRKIQIEYNQKHGIIPQTVRKGIRQIIEATVS
VAEEEEKYEVVEKEIVENMTKEEIEEYIKELEQEMKKFAIELEFEKAAKVRDKIFELKKL
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttaagcttgtttcagacttcaaaccaactggcgaccagccaaaagcaata
gagatgttaacagaaggaattttaaaaggtgaaaaatttcagacccttttaggtgttaca
gggtctggcaagacattcacaatggcaaaggtcatagagaatgttcaaagaccaacgctt
gtgctggcacataacaagactttagcagcacagctttgtagtgagtttagagaatttttt
ccagaaaatgcagtggaattctttgtaagttactatgactattatcagcctgaagcttat
attccggaaactgacacgtacattgaaaaggattcatctataaatgaagagattgacaaa
ctcagacactcagctacatctgccttatttgaaagaagagatgttataattgttgcaagt
gtatcctgtatttacagtttgggcagtcctgaggattatttaaatcttactatttctttg
cgccttggcatgataaaagacagagatgaggtcataagagagcttataagaatgcagtat
gaaagaaatgacattgattttagaagaggaagatttagagtaagaggagacgtacttgaa
gttttccctgcatctaatacagacagggcgataagaatagaattttttggggatgagata
gaaagaatcacagagtttgatgttgtaacaggtgaggtaattggtcgaagaaaccatgtt
gcaatttttccagcatctcactatgtgacaacagctgagaaattgaaaagagcgataaaa
agtatagaagaagaacttgaacaaaggctaaaagagctaagaagtatgggtaagcttgtt
gaggctcagaggcttgagcagagaacgcgctatgacatagagatgcttcaggaaatgggt
ttttgtaaagggatagagaactattcaaggcatttaactggcagatcacctggaagtcca
ccgtatactttgcttgattattttccaaaggatttcataatgttcattgatgagtcgcat
gttacaatacctcaagtaagagctatgtacaatggcgacaaagcaagaaaagataccctt
gttgaatatggttttagacttccatctgcgtatgataacagaccattgacatttgaagag
ttcgaagaaaagctcaaccaagtaatttttgtaagtgcaacacccggaccgtatgagctc
aaaaaatcttcacgcattgttgaacaaattataagaccgacagggcttgttgatcctgaa
attgaggttcatcctgtacagggtcagattgaccatctgattggtgagatacgaaagaga
gtagaaaagaaccagagagtgcttgttactacccttaccaaaaagatggctgaaagtctt
actgagtatttaaaagatgtgggaatcagggtcagatatatgcattcagacatagataca
attgagcgtatgcagattatcagggatttgcgccttggcaagtttgatgtgctggtgggg
ataaatctgctcagagaaggccttgaccttcccgaagtgtcacttgttgcaattttagat
gctgacaaagaaggttttttgaggtcagagacttcgcttattcagacaattggccgcgct
gcaagaaatgttgatggaaaggttataatgtatgcagatagaattacaaacgctatgcaa
agagctattgatgagacaaaccgacgtagaaaaattcagatagaatacaaccaaaaacac
ggaattatacctcaaactgtaagaaaaggtataagacagataattgaggcgacagtgtct
gtggctgaagaggaagagaaatacgaagttgtggagaaagagattgtagaaaatatgaca
aaggaagagatagaagaatatatcaaggaacttgaacaggagatgaaaaagtttgctata
gaacttgagtttgaaaaggccgcaaaagtaagggacaaaatatttgaactcaaaaaactt
ctttaa
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