Caldicellulosiruptor acetigenus I77R1B: Calkr_2455
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Entry
Calkr_2455 CDS
T01356
Name
(GenBank) type 3a cellulose-binding domain protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cki
Caldicellulosiruptor acetigenus I77R1B
Brite
KEGG Orthology (KO) [BR:
cki00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Calkr_2455
Enzymes [BR:
cki01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Calkr_2455
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
CBM_3
RGI_lyase
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
ADQ41890
UniProt:
E4S7Z0
LinkDB
All DBs
Position
complement(2555221..2558460)
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AA seq
1079 aa
AA seq
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MEKKRNYGTLLGTVVFILLIIYCVFNPLAPLINNVKGAVSSQIEKLNRGLVAIKVNNGIY
LTWRMFGSDPADIGFNIYRNGQKINQIPIKDSTNYLDTGGNTSSKYFIRPVINGQEIESS
EEVSVLPTNYIEIKLNRPPTSPLGAAYSPNDASVGDLDGDGEYEIILKWDPSDSKDNSQS
GYTSEVFLDAYKLNGKFLWRIKLGKNIRAGAHYTQFIVYDLDGDGKAEVACKTADGTVDG
QGNVIGDPNANWVNSSGYILDGPEYLTIFDGATGKALKTVNYIPPRGKVSSWGDSYGNRV
DRFLAGVAYLDGSRPSLIMCRGYYTKTYIVAWNWRDGQLTKVWQFDTGEIGDGYRDDYEG
QGNHNLSIADVDNDGKDEIIYGAMAVDDNGQPLYTTKLGHGDAMHVTDIIPDRPGLEVWQ
CHEDASKGGGASLRDARTGQILLRVPTNSDCGRALTADIDPTKKGLEVWAAGVGLYDCKG
NKISDSMPPYNFAIWWDGDLLRELLDKTNVYKWDYNTNSSKTIFTASGCSSNNGTKATPC
LSADILGDWREEVIFRTSDDSAIRIYITTLQTSYKIPTLMHNRQYRVSIAWQNVAYNQPP
HTNFYFGEGMDLESIYSFFEKGTLGFPITPTPTVTVTPLPTPTPTPTATVTTIPTPTPTP
TPTPTVTTTVTPTPTPTPTVTVVPTPTPTPSTPPVSTGVKVQYKNMEQNATTNSIRAWFK
VVNNTSSDIDLSRVTIRYWYTVDGDKAQSAVCDWAQVGSSNVNFKFVKLSQAVSGADYYL
EIGFSSGAGKVAAGKDSGDIQIRFNKSDWSNYNQADDWSWSQNMTSYGDNTKVTVYVDGK
LVWGQEPGGLSTSPTPSATPTPTPTPTATVTTTPTPTPTPTVTATPTPTPTPTSTPAGNI
QLSDSYGALKVLYANGATVSSTSQLVIKVKVQNTGDRAIDLGRVKVRYWYTGDGADVEGL
TVASSLGSKVAAKVVKVGATAGGADRYVEISFASGVVLNAGSTTSEIRVTVSRASGSYNQ
SNDYSVMSATSYVENRKITGYIDDVLVWGQEPSRGIKAAGSTPTVAPSPTPTISIDSNN
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaaagaaattatggaacattgttggggacagtggtttttattttgctaatt
atatattgtgtatttaatcccttagctccactaataaataatgttaaaggtgcagtttca
agtcaaattgagaaattaaacagaggattggttgcgattaaagttaataatggaatttat
ctcacatggcggatgtttggttcagatccagctgatattggtttcaatatataccgaaat
gggcaaaaaataaaccaaattcctattaaagatagcacaaattatcttgatacaggaggg
aatacttcttcaaaatactttattagacctgttataaatggacaagaaatagagagttcg
gaagaagtttcagtcttacccactaactatatcgaaattaaattaaacagaccacctacc
tcacctttgggggcagcatattctccgaatgacgcaagtgtaggagatttagatggtgac
ggagaatacgaaataatccttaaatgggatccaagtgattctaaagataactcccaatca
ggatatacaagtgaagtatttttggatgcatataaactcaacggtaagtttttatggaga
ataaagcttggcaagaatattagagctggagcacactatacccagtttattgtttatgat
ttggatggagatggcaaggcggaagtcgcttgcaaaacagcagatggcacagtagatgga
caaggtaatgttataggtgatccgaacgctaattgggtgaattcaagtggttacattctt
gatggacctgaatacttgacaatatttgatggtgctacaggaaaggcattaaagacagta
aattatataccacctcgtggaaaggtttcctcatggggagattcatatggtaacagagta
gacagattcttagcgggtgtagcgtatcttgatggttcgcgaccaagtttgataatgtgc
aggggatattatacaaaaacttatattgttgcatggaattggagagatggacaacttact
aaggtttggcagtttgatactggtgaaatcggtgatggatacagggacgattatgaagga
caagggaatcacaatttgagcattgcggatgttgataatgatgggaaagatgaaattata
tatggtgcaatggcagttgacgacaatggtcaacctctttatacgactaagttagggcat
ggagatgctatgcatgttacagatattattcctgaccgacctggattggaagtttggcaa
tgtcatgaagatgcgtcaaaaggtggaggagcaagcttaagggatgcacgaactggccag
attttgttgagagttccaactaacagcgattgtggacgtgcgctaactgctgatatagat
ccaacaaaaaaggggttagaagtgtgggcggcaggagtcggcttatacgattgtaaaggg
aacaaaatctctgattcaatgccaccgtataattttgctatttggtgggatggagatctt
ctcagagaattattggacaaaactaatgtatataagtgggattataatactaactcatct
aaaactatatttacagcaagtggatgttcatcaaataatggtacaaaggcaacgccgtgt
ttgagtgcagatatattaggtgactggcgcgaggaagttatattccgaacatccgacgat
tcagcaattaggatatatattactactttacagacatcatacaaaattccaacattgatg
cataatcgtcaatacagagtgtcaatagcatggcaaaacgtagcttacaaccagccaccc
catacaaacttttattttggagaaggtatggatttggaaagtatttattcattttttgaa
aaaggtacgttagggttccctataactccaacaccgactgttacagtaactccacttcca
actccgacgccaacacccacagcaactgtaacaaccatacctactccaacaccaacacca
acaccaacaccgacagtgacaacgacagtgacaccgacgccgacaccaacaccgacggtg
acggtagtaccgacaccgacgccgacgccgagcacaccgccagtgagcacaggtgtgaag
gtacagtacaagaacatggagcagaatgcgaccacgaactcaatcagggcatggttcaag
gtagtgaacaatacaagcagtgatatagatcttagcagggtaacgataaggtactggtac
acagtggatggagacaaggcacagagtgcggtatgtgactgggcacaggtagggtcgagc
aatgttaatttcaagtttgtgaagttaagccaggctgtgagtggagcggactattattta
gagataggatttagcagtggagcaggcaaggtagcggccgggaaggacagcggggatata
cagataaggtttaacaagagtgactggagcaattacaaccaggcagatgactggtcatgg
tcacagaacatgacgagttatggagataatacgaaggttacggtgtatgtagacggcaag
cttgtatggggacaggagccgggtggattgagcacaagtccaacgcccagtgcgacgccg
accccaacaccaacacccacagcaactgtaacaaccacacctactccaacaccaacaccg
acggtaacagcgacaccaacgccgacaccgacgccgacgagcacacctgctggcaatatt
caactgagcgacagttacggtgcattgaaggtgttatatgcgaatggagcgacagtgtca
agcacgagccagttagtgattaaggttaaggtacagaatacaggggacagagcgatagac
cttggcagggtgaaggtaaggtactggtacacaggagatggagcagatgttgagggattg
acggtagcgagcagtttaggcagcaaggtagcagcgaaggtagtgaaggttggagcgaca
gctggcggagcggacaggtatgtagagataagctttgcaagcggagtagtattgaacgcg
ggcagcacgaccagcgagataagggtaactgtaagccgcgcgagcggtagttataatcag
tcgaatgactattcagtgatgtcggcaacaagctatgtagagaacaggaagataacaggg
tatatagatgatgtacttgtatggggtcaggagccatcgagggggataaaggcagcaggt
agtacaccgacggtggcaccgagtccgacgccgacaataagtatagattctaataactga
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