Caldicellulosiruptor acetigenus I77R1B: Calkr_2500
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Entry
Calkr_2500 CDS
T01356
Name
(GenBank) LexA repressor
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cki
Caldicellulosiruptor acetigenus I77R1B
Pathway
cki03420
Nucleotide excision repair
cki03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Calkr_2500
03430 Mismatch repair
Calkr_2500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cki03400
]
Calkr_2500
Enzymes [BR:
cki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Calkr_2500
DNA repair and recombination proteins [BR:
cki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Calkr_2500
MMR (mismatch excision repair)
Other MMR factors
Calkr_2500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S24
UvrD-helicase
UvrD_C
HSDR_N_2
AAA_19
Viral_helicase1
UvrD_C_2
AAA_22
AAA_30
AAA_12
ResIII
SLFN-g3_helicase
DEAD
T2SSE
Motif
Other DBs
NCBI-ProteinID:
ADQ41934
UniProt:
E4S8F2
LinkDB
All DBs
Position
2616063..2618522
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AA seq
819 aa
AA seq
DB search
MNLNIEQKKLSQAKPNGHMLVKGVAGSGKTTVAIYRVVYLLNEYCFAPDDKILMVTFNKT
LVNYLKYLYNKLEDAYISFDALVNDNKDKVKIASIDSIIYGFFQEYKEYSGEKLEIVNNK
ATKYNFLNQAIVKIKEKYPKVQYIDLSFANFLLDEIEWIKSCNIRELEEYQSTDRIGRTV
QNQKDIPQKIVKNSETRKAIFELMQLYTSLLKENGLVDFKDMALIVLDYLKANEHKITKY
THIIIDESQDLTKVQLEILKLLYNSEKSYSSIMFIADTAQSIYTHSWLIRGRSFASIGFD
MTGKSYTLSKNYRTTVQIANLAYSLIEKTPEIIEDENFVKPALIDKQGPLPVLKIFQTEE
QEAEFVYNEIVNNLAFEFQLKDITVICKNRKYLESFYSYVSSKGLKAIFLNSDSGENFEE
EGIRLITMHSIKGLEFKVVFIIGLNSNIIPYSSCEDNEVAKLQETTDKKLFYVGMTRANE
RLYLCCSRKPSKFLSELNTKLLRIDSKCNLRSFYKLRIDDYRYINKIRDIYCKEEEVRQW
LINELIETYKYPEELIDVEYRINVFSKPAFVDVVVFRYDSNKEKVPFIIFEVKPYLSGIG
QGAEQLKSYLNVVPRCSFGVVTDGNSILIFDSRFEIVDDFPHFDISMLPSQIEEYEVVDF
RRSKTYRLRKLVDTGHIDLVQDGHLIEIKSEDVLTINLYEKVAAGTPVETSDEAIGKVAL
PTSIISDPERYFAIKVKGDSMVEANIKDGDIAIVQKCNTAENRDIVIAWLDGEITVKRFC
KMGSTVLLIPENSKYEPINIKEGELRIVGKVVGVMRKKR
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttgaacattgagcagaagaaactgtctcaggcaaaaccaaatgggcatatgctg
gtaaaaggtgttgcaggttctggaaaaacaacagttgcaatatacagagtagtttatctt
ctgaatgagtattgttttgcacccgatgacaagattctaatggtaactttcaacaaaact
ctggtaaattatttgaaatacctctataacaagttggaagatgcatatatttcatttgat
gctctggtaaatgacaacaaggataaggttaagatagcttcaattgacagcattatctat
ggatttttccaggaatacaaagaatattctggcgaaaaacttgagattgtcaacaacaag
gctacaaaatataattttctcaatcaggcaattgttaagatcaaagaaaaatacccaaag
gttcaatatatagacctttcttttgccaattttcttttagatgagattgagtggataaaa
tcatgtaatataagagaattagaggaatatcagagcactgataggataggtagaacagtt
caaaatcagaaagacatacctcagaagatagtaaagaattcagaaacaagaaaagctata
tttgaacttatgcagctttatacctcgcttttaaaagaaaatggacttgtcgattttaaa
gacatggctttgattgtactggattatttgaaagcaaacgaacacaagattacaaaatat
acgcacattataatagatgaaagtcaagacctcacaaaagttcaattagaaattttaaag
cttctttataactccgaaaaaagctattccagcataatgtttattgcagacacagcccag
agcatttacacacactcatggcttatcaggggaaggtcgtttgcaagcattggatttgac
atgacaggaaaaagctatacgctgtctaaaaactacaggacaactgtccagattgcaaat
cttgcatatagcttaatagaaaagacaccagaaataatagaagatgaaaattttgtaaaa
cctgctttaatagacaagcaaggacctttgcctgtactaaagattttccaaaccgaagaa
caagaagcagagtttgtatacaatgaaattgtgaacaacttagcatttgaatttcaacta
aaagatattacagtgatttgtaaaaatagaaaatatttggagtctttttacagttatgtc
tcttcaaaagggctgaaagccatatttttaaactcagattcgggtgaaaactttgaagaa
gagggtataaggcttatcaccatgcactctataaaaggtttggagttcaaagtggttttt
atcattggacttaatagcaacatcatcccatactcatcatgcgaagacaatgaggttgca
aagctgcaagagacaactgacaaaaagctcttttacgttggtatgacaagagcaaacgaa
aggctgtatttgtgctgctcaagaaaaccatcaaaatttttgagcgagcttaatacaaaa
cttcttcgaattgattctaaatgcaatcttcgcagtttttacaagctgaggattgatgat
tacagatacataaacaaaatcagggatatctactgcaaagaagaagaggttcgccagtgg
cttataaatgaacttattgaaacttataaataccctgaagagttgattgatgttgagtac
aggataaacgtattttcaaaacctgcatttgtggatgttgttgtgttcaggtatgattca
aataaagaaaaggtaccatttatcatttttgaggtaaaaccatatctttctggaataggt
cagggggcagagcagctgaaaagttatttgaatgtggttccaagatgttcttttggagtt
gtaacagatggaaacagcattttaatatttgacagcagatttgaaattgttgacgatttt
cctcactttgatataagtatgcttccttctcaaattgaagaatatgaggttgtagatttc
agaaggtcaaaaacttacagactcagaaaattggtagacacaggacatattgacttagtt
caagatggacatctcatagagataaaatcagaagatgtgctcacgataaacctttatgaa
aaggttgcagcaggaacacccgttgaaacatctgatgaggcaattggtaaggttgccctg
ccgacttctattatctctgaccctgaaagatattttgctattaaagttaagggcgatagt
atggtggaagcaaatataaaagatggagacattgcaattgtgcaaaaatgcaatactgcg
gaaaacagagatattgttattgcatggcttgacggtgaaataactgtgaaaagattttgc
aaaatgggaagcacagtcctgctcattcccgaaaacagcaaatatgagccaataaacatc
aaagaaggggaacttcgtatagttggaaaagttgtcggtgtgatgaggaaaaaaagatga
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