Clostridium kluyveri DSM 555: CKL_0121
Help
Entry
CKL_0121 CDS
T00564
Name
(GenBank) Predicted exonuclease, sbcC related
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ckl
Clostridium kluyveri DSM 555
Brite
KEGG Orthology (KO) [BR:
ckl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ckl03400
]
CKL_0121
DNA repair and recombination proteins [BR:
ckl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CKL_0121
Archaeal homologous recombinant proteins
CKL_0121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
ABC_tran
AAA_22
Motif
Other DBs
NCBI-ProteinID:
EDK32191
UniProt:
A5N4G0
LinkDB
All DBs
Position
complement(109596..113090)
Genome browser
AA seq
1164 aa
AA seq
DB search
MKPISLKIKGLNSFESSQEIDFEKLTERGIFGIFGPTGSGKSTVLDGITLSLYGEVARKS
SNFINVNCNNLYVSYKFQISEKKVKTYRVEREFRRDQKSGSVRSKTARIISIEDNIEKIL
EEGSKNVTEKCQEILGLKLEDFTRTVVLPQGKFSEFLRLEGKDRRNMLERLFGLQKYGDN
LSFKLNLKNKEEKMKFHELEGQLKGYEGINEEILEVKMMQMKQLENSYEETKKEYNYLEK
KYNDENDLWKLQLELEQKSYELELLTKRENEIKNYEKKIKLAEGTLKVKPYADNFKNTSA
QIKITKDNLSNLNIKINSIKKNKNEIEILLNEARDKKDKKLPELKVKEQKIKDAIEEQKL
LEKLRQEKILLENDIESLKEKFNNKNDQVITNENYTSNLLNEMKTKEKLIETLKISEEYR
EKINEGIITLTNYENKILQRDKLIESIKNCEENIKAAVYRKEILLKHINEIEKTLSHCNT
RLNILIKTCPGDENTLLNFHQRLSYFKTKWDKYNEYMDLLDKNKGMVENLEKDLRNITAF
ESNMRNSIEELEKKIYQFERDNMAIMLIHTLREGDPCPVCGSVYHEKKEMGKIDRDNLEK
LKSHCLEKKNKIEKSTKETIEIRTNIALKRKNIEENKKKIEELGEDFKSTPIKILQDKFY
KLKQQIYEFKREKSLIEEEIKALKDNKNSLDIDYNKELTIEIENSTQLIKLQQDLKLEEE
QIKLIKDQLSLLKADLSVEDLKNKANEIIETQKRTSSLEREVKKIRKTIEVKQSEKDEIR
YYITELKEKLSEKQTRTREMNKSIVEKEYNIKNKVGEITDLNHFNREVCNLIEKIESEYI
KTEKTARKIIKEYDEINNKIILAQSNLVNLNERNIKEEKNLKSILYEQGFEDIYEVEKFF
MNKSEIEKLNKEIQEYRNSISRIKGAIENIYKNMKGRTLTKDQWYKTQNDKNKKSYELEK
LYEDKITLNKEVTSINTRLLELKDLLNKKKKIEHKLALLSDLEKLFKGKKFVEFIAANQL
KYISLEADKQLREITCGNYGLEVDEDGRFFIRDYKNGGKERDASTLSGGETFVASLALAL
ALSSQIQLKGRSPLELFFLDEGFGTLDDNLLEIVMDSLEKIHNDKLSIGVISHLEVIKER
MPVKLIVTTAESGMGGSKVRIEKS
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctatcagcctgaaaataaaaggattaaatagctttgagagcagtcaagaaatt
gattttgaaaaattaacagaaagaggtatattcggtatatttggccccactggcagtgga
aaatctactgtgcttgatggaattaccttgtctctatatggtgaagtagctagaaaaagt
tcaaattttataaatgtaaattgcaacaacttatatgtaagttataaatttcagatatct
gaaaaaaaggtaaagacttatagggtagaaagggagtttagaagagaccaaaaaagtggc
agcgtaagaagtaaaacagccagaataataagtattgaagataatatagaaaaaattctg
gaagaagggtctaaaaatgtaactgaaaaatgtcaggaaatactgggactgaaactggag
gatttcacaagaactgtagtacttccccaaggtaaattcagtgaatttttaagactagaa
ggaaaagatagaagaaatatgcttgagaggttatttggcctacaaaaatatggagataat
ctttcatttaaattgaatttaaaaaataaagaggaaaaaatgaagttccatgagcttgag
ggacaacttaaaggttatgaaggtatcaatgaggaaattctagaagtcaagatgatgcaa
atgaaacaattagaaaatagctatgaagaaactaaaaaggaatataactatttagaaaag
aaatataatgatgaaaatgatttatggaaacttcaattggaattagagcagaaatcttat
gaactagagctgttaacaaaaagagaaaatgaaataaaaaattatgagaaaaaaatcaaa
ttggcagaaggtactttaaaggtgaaaccttatgcagataatttcaagaatacatctgca
caaataaaaattactaaagataacttatctaatttaaatattaaaataaacagtataaaa
aaaaataaaaatgaaatagaaatattactaaacgaagcaagagataaaaaagataaaaaa
ctacctgaattgaaggtaaaagaacaaaaaattaaagacgccattgaagaacaaaaacta
cttgaaaaacttaggcaggagaaaatccttcttgagaacgatatcgaatctttaaaggaa
aagttcaataataaaaatgaccaggtaataacaaatgagaattatacctctaatttgtta
aatgaaatgaaaactaaagaaaaattgatagaaactttaaaaatatctgaagaatatagg
gaaaaaataaatgaaggtataattactttaactaattatgaaaataaaatactacaaagg
gacaaattaattgaaagtataaaaaattgtgaagaaaatataaaagcagcagtttataga
aaagaaatactattaaaacatataaatgaaatagaaaagaccttatctcactgtaataca
cgattaaatatactgattaaaacttgccctggagatgaaaatacactattaaattttcac
caacgtttgtcttatttcaaaacaaaatgggataaatataatgagtatatggatttgtta
gataaaaataaaggcatggttgaaaatttagagaaagacctaagaaatataactgccttt
gaatctaacatgagaaattctatagaagaattagagaaaaaaatttaccaattcgaaaga
gacaatatggcaattatgctgatacacactctgcgagagggtgatccatgccccgtatgt
ggttctgtatatcatgaaaaaaaggaaatgggtaaaattgatagggataatcttgaaaaa
ttaaaatcacattgccttgaaaaaaagaacaaaatagagaaatcaactaaagaaacaata
gaaattcgaactaacatagcattaaaaagaaaaaatatagaggaaaataaaaagaaaatt
gaagaactaggggaagattttaaatcaacacctataaaaattcttcaagataaattttat
aaattaaaacagcaaatatatgaatttaaaagagaaaaaagtcttatagaagaagaaata
aaagcattgaaagacaacaagaattctctggatattgactataataaggaacttacaata
gaaattgaaaatagtacccaactcataaagttacagcaggatttaaaattagaagaagaa
caaataaaattaataaaggaccaattatctttattaaaagctgatttatctgtagaagat
ttaaagaacaaagcaaatgaaattatagaaacacaaaaacgtacatccagcctggaaagg
gaagtaaagaaaataaggaaaaccatagaagtaaagcaaagtgaaaaagatgaaattaga
tattatattacagaactgaaagaaaaactaagtgaaaaacaaacaagaactcgggaaatg
aataaaagcatagttgaaaaagaatataacataaaaaataaagtgggtgagataacagat
cttaatcatttcaatagagaagtatgtaatcttatagaaaaaattgaaagtgaatatata
aaaactgaaaaaaccgccaggaaaataataaaagaatatgatgaaattaataataagata
atattagctcaaagtaatctagttaatttaaatgaaagaaatataaaagaagaaaaaaat
cttaaaagtatactgtatgaacaagggtttgaagatatttatgaagttgaaaagtttttt
atgaataaatcagaaatagaaaaattaaataaagagatacaagaatatagaaattctatt
tcaagaataaaaggtgctatagaaaacatttataaaaatatgaagggaagaactttaaca
aaagatcagtggtataaaacacaaaatgataaaaataaaaagagttatgaactagagaaa
ttatatgaggataaaataacattaaataaagaagtaacttctataaatacaagattactg
gaactaaaggatttattaaataaaaagaaaaaaatagaacataaattggctctcctaagt
gatctagaaaaattatttaaaggtaaaaagtttgtggagtttatagcagcaaatcaattg
aaatatatatccttagaggccgataaacaattgagggagattacctgcggcaattatgga
ctggaagtagatgaagacggaagatttttcattagggattataaaaatggagggaaggaa
agagatgcctccacattatcagggggtgagactttcgttgcatctttggcactggcactg
gcactgtcatctcaaatacaattaaaaggcagatcacctttagaattgtttttcctggac
gaaggctttggaactctagatgacaatttactggaaatagtgatggactcactggaaaaa
atccataatgacaaattgtccataggagtcataagtcatctggaagttataaaagaaagg
atgcctgtaaaacttatagtaactactgctgaatctggaatggggggaagtaaagtaaga
atagaaaaaagttaa
DBGET
integrated database retrieval system
