Clostridium kluyveri DSM 555: CKL_0669
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Entry
CKL_0669 CDS
T00564
Symbol
polA
Name
(GenBank) PolA
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ckl
Clostridium kluyveri DSM 555
Pathway
ckl03030
DNA replication
ckl03410
Base excision repair
ckl03420
Nucleotide excision repair
ckl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ckl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CKL_0669 (polA)
03410 Base excision repair
CKL_0669 (polA)
03420 Nucleotide excision repair
CKL_0669 (polA)
03440 Homologous recombination
CKL_0669 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ckl03032
]
CKL_0669 (polA)
03400 DNA repair and recombination proteins [BR:
ckl03400
]
CKL_0669 (polA)
Enzymes [BR:
ckl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CKL_0669 (polA)
DNA replication proteins [BR:
ckl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CKL_0669 (polA)
DNA repair and recombination proteins [BR:
ckl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CKL_0669 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CKL_0669 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
EDK32723
UniProt:
A5N5Z2
LinkDB
All DBs
Position
659557..662199
Genome browser
AA seq
880 aa
AA seq
DB search
MSREKLLILDGHSLMNRAFYALPDLTNSEGTHTNAVYGFINMLLKMKKEIEPSHIVCTFD
RSAPTFRHDKYSEYKAGRKRMPPELSEQFPIVKEILELLSINIFEIDGFEADDLMGTLSV
FAEKKGMEVYIVTGDRDALQLATDSVKIVITKKGITQKEIYDRNKIIDDYGVTPTEFIDV
KGLMGDASDNIPGVPGIGEKTALKLIKEYKSIENVLCNIDNIKGKKVQENLKNYMEQAVF
SKKLATIVTDVPIELDLQSIESKEQYNAEGLRKLFEKLQFKSLMDKIPKVEEQDKIEVED
FQVECEVIDTLNKVHNFIDSLEAEDMKNKLLYINFKVVDENSYAKNYIDKIFINIGEKNF
EIHIKEIYDENKIKAVETAKMLFENSSLSKVSYDVKVPCSILHRMGIKLLGIEFDIKIAA
YLMDPARTNYELPDIIKEYLNIEISEEREDCFIKETLLFSRLYSTLKKKISDSSMDKLLY
EVEQPLTFVLASMECEGFKVDKDKLTEMEEKFKIEIDKVQKEIYFLSEEEFNINSPKQLG
KILFEKLDLPVIKKTKTGYSTNADVLERLHGKHPVIEKIIYYRQLTKLYSTYIEGLKGVI
EEDGKIHSNFNQTVTTTGRLSSTEPNLQNIPIKYEMGKEIRKIFIPDNRDCVILSADYSQ
IELRVLAHISGDENLINAFINHNDIHTKTASEVFNVPLGEVTSTQRSNAKAVNFGIVYGI
GDFSLARNLNIPRKEAKSYIDAYFEKYPKVKLYMNDIVKQAEKNFYVTTILNRRRFIPEI
KSSNKIIKALGERFAMNTPIQGSAADIIKIAMVNVFNRLKDNNFKSKIILQVHDELVLNV
YKDELKDVKDIVKEEMENVFKLKVPLEVDISIGDNWYQVK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgagaaaaattattgatattggatggacatagtttaatgaatagagctttttat
gcactgccggatttgaccaattcagaagggactcatacaaatgcagtttatggatttata
aatatgctgttgaaaatgaaaaaggaaattgaacccagtcacatagtatgtacttttgat
agaagtgcacctacctttagacatgataaatatagtgaatataaagccggcagaaaaaga
atgcctcctgagctgtcagaacagtttcctatagttaaggaaatattggagcttttatcc
ataaatatttttgaaatagatggatttgaagcagatgatcttatgggtacattatccgtt
tttgcagaaaaaaaaggcatggaagtatatatagttacaggagatagagatgccctccag
ctggccacagattcagtgaaaattgtaataactaaaaaaggtataacacaaaaggaaata
tatgatagaaataaaattatagatgattatggagtaacccctacggaatttatagatgta
aaagggcttatgggggacgcttcggataatattcctggggtacctggtataggagagaaa
actgcccttaaattgataaaagagtataaaagcatagaaaatgtactttgtaatatagat
aatattaaagggaaaaaagttcaagaaaatttaaaaaattatatggaacaggctgtattt
agtaaaaagcttgccactattgtcacagatgttcctatagaactggatttacaatctatt
gaatcgaaagaacaatataatgccgaaggcttaagaaaattatttgaaaaacttcagttt
aaatccttaatggataaaatacctaaagtggaggaacaggataaaatagaagtggaagat
tttcaggtagaatgtgaggttatagatactttaaataaagttcataactttatagactct
ttagaagctgaagatatgaaaaataaattactttatattaatttcaaagttgtagatgag
aatagttatgctaaaaattacatagataagatatttataaatataggagaaaaaaatttt
gaaatacacataaaagaaatatatgatgaaaataaaattaaagcagtggaaacagctaaa
atgttgtttgaaaattctagcttaagtaaagtgagttatgatgtgaaagtaccttgcagt
atattgcatagaatgggaataaagcttttaggcatagaattcgatataaagatagcagct
tatttaatggatccggctaggaccaactatgaattaccggatattattaaggagtatctg
aatatagaaatctctgaggaaagggaagattgttttataaaagaaacattgttgtttagc
aggttatactctactttaaagaagaagatatcagattcttctatggataaattgttgtat
gaagtagaacagccacttacttttgtactggcatctatggagtgtgaaggatttaaggtg
gataaggataagttaactgagatggaggagaaatttaaaatagaaatagataaggtacaa
aaggaaatatattttctctccgaggaagaatttaatataaattctccaaaacagctgggt
aaaatattatttgaaaagttggatctgcctgtcataaaaaagactaaaacgggatattcc
actaatgcagatgtattggaaagattacatggtaaacatcctgtaattgaaaaaataatc
tattatagacagcttactaaattatattccacatatattgaaggattaaaaggagtaata
gaggaagatggtaagattcattctaattttaatcaaacagtaactactacagggagactt
tcaagtaccgaacccaatcttcaaaatatacctataaaatatgagatgggaaaagaaata
agaaaaatattcataccagataatagggattgtgttatactctcggcagattactcgcaa
atagaacttagggtgcttgcccatatatcaggggatgaaaatttaataaatgcatttata
aaccacaatgatattcacactaaaactgcatcagaggtatttaatgtacctttgggagaa
gtaacatctacacagagaagtaatgcaaaagccgtaaattttggtatagtatatggtatt
ggtgattttagcttagcaaggaatttaaatatacccagaaaagaagcaaaatcttatata
gatgcttattttgaaaaatatcctaaagtgaagttgtacatgaatgatatagtaaagcag
gccgaaaagaatttttatgttaccaccattttaaataggagaaggtttataccggagata
aaatcttctaataaaataataaaagctctaggagaaaggtttgccatgaatactcccatt
caaggaagtgcagcggatattataaaaatagctatggtaaatgtttttaatagattaaaa
gataataattttaaaagcaagataatacttcaggttcacgatgaactggtattaaatgtg
tataaagatgaactaaaagatgtaaaagacattgtaaaagaggaaatggaaaatgtgttt
aagctaaaggttcctcttgaagtggatataagtataggggataattggtatcaagttaaa
taa
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