KEGG   Clostridium kluyveri DSM 555: CKL_1170
Entry
CKL_1170          CDS       T00564                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
ckl  Clostridium kluyveri DSM 555
Pathway
ckl02020  Two-component system
ckl02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ckl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CKL_1170
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CKL_1170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ckl03021]
    CKL_1170
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:ckl02035]
    CKL_1170
Transcription machinery [BR:ckl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CKL_1170
Bacterial motility proteins [BR:ckl02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    CKL_1170
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 UPF0122 HTH_23
Other DBs
NCBI-ProteinID: EDK33212
UniProt: A5N7D1
LinkDB
Position
1214512..1215237
AA seq 241 aa
MALANELNIKEELVKKYLPLVKYIASRVIIGKTKYIEYEDLVSYGTLGLMDAINKFDKDR
GMKFSTYASIRIKGSMIDELRRNSPISKGAMDKLNRYNAAVEYLQGELGREPNSVEIASK
LGISLKEMMEIENYINYISMVSLEDLVFSDEDNIPIMGTIEDTKSPSPERNLEEKEKLKY
LAKALELLNEKDNLVLTLYYYEELTLKEIGHILNVSESRVCQLHSRAIVHLRKAMAKLKY
M
NT seq 726 nt   +upstreamnt  +downstreamnt
atggctttggcaaatgaattaaatataaaagaagaattagttaaaaaatatcttcctcta
gtgaaatatatcgcgtctagagtcataatagggaagactaaatatattgaatatgaagat
ttagtcagctatggaactttaggcttgatggatgccataaataagtttgataaggatagg
gggatgaaattttccacttatgcttccataagaataaagggctctatgatagatgaacta
agaagaaatagtcctatttccaaaggagctatggacaagcttaatagatataatgcggcg
gtggaatatcttcaaggagaattaggcagagaacctaatagtgttgaaatagcaagtaag
cttgggatatctttaaaagaaatgatggaaattgagaattatataaattatatatctatg
gtttctttagaggatctggtattttccgatgaggataatattcctattatgggtaccata
gaagatactaaaagtcccagtccagaaaggaacttggaggagaaagaaaaattaaaatat
ttagccaaagctttagaacttttaaatgaaaaagataatttagtacttactttatattat
tatgaagagttaacattaaaagaaataggtcatattttaaatgtatctgagtctagagta
tgtcaacttcatagtagggcaatagtgcatttgagaaaagccatggcaaaattgaaatat
atgtaa

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