Clostridium kluyveri DSM 555: CKL_1437
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Entry
CKL_1437 CDS
T00564
Symbol
pnp
Name
(GenBank) Pnp
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ckl
Clostridium kluyveri DSM 555
Pathway
ckl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ckl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CKL_1437 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ckl03019
]
CKL_1437 (pnp)
03016 Transfer RNA biogenesis [BR:
ckl03016
]
CKL_1437 (pnp)
Enzymes [BR:
ckl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CKL_1437 (pnp)
Messenger RNA biogenesis [BR:
ckl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CKL_1437 (pnp)
Transfer RNA biogenesis [BR:
ckl03016
]
Prokaryotic type
tRNA degradation factors
CKL_1437 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
KH-I_KHDC4-BBP
PCB_OB
S1_2
Motif
Other DBs
NCBI-ProteinID:
EDK33479
UniProt:
A5N848
LinkDB
All DBs
Position
1476855..1478981
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AA seq
708 aa
AA seq
DB search
MNEVIQTTVAGRTLKVDCEKVGMLSNCGMLISYGDTVVLINANASDKPREGIDFFPLSIE
YEERLYSVGKIPGGFIKREGKPSEKAILNARAIDRPLRPLFPKGYRNDVQVVCTVLSVDQ
DNLPNIVAMNGASLALCISSIPFITPVGSVAVGLVDGNFIINPNLEDREKSTLNLTVCAT
KERVMMVEAGACEVPEDIMYDAIIFGFEECKKIALFQEEVMKKYGKKKDEPDLYKVNEDL
EEEVRGFAFDMIKDAMYIVDRDERNKVLKDIDEKLEEQFSEDYADNKSDIADVVYRVKKE
IVRGMLLKEHRRVDGREFDEVRPISCEVGFLPRAHGTGLFTRGLTQVMTVVTLGSLGDVQ
ILDGVGLEDSKRYMHHYNFPSYSTGEVRPLRGPGRREIGHGALAEKALEPLIPMEEQFPY
TIRLVSEVLSSNGSTSQASICGSTLALLDAGVPIKRPAAGIAMGLVTSEDLSQEEILTDI
QGLEDFFGDMDFKVGGTEKGITAIQFDTKIHGLSNKCIKETLEKARTARLYILEKMKQCI
PEHRAEVSKYAPKTYIMSIPPDKIRDVIGSGGKVINKIIAETGVKIDIKEDGKIFVMSED
SEGAKKALKIIDDLTREILVGEIYLGKVTKITNFGAFVEIHKGKEGLVHISKLDFTRVNK
VEDIVSVGDEILVKVIEIDNQGRINLSRKDAIKDSEKKEQNEKDVQKK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagttattcaaactactgtagcaggaagaactttgaaagttgactgtgagaag
gtaggtatgttgtctaattgtggtatgctcataagctatggtgatacagtggttttaatc
aatgcaaatgcttcagataagccaagagaaggaatagatttttttcctttaagtatagaa
tatgaagaaaggttatattctgttggaaagattccaggaggatttataaaaagggaaggt
aagccctcagagaaggcaatattaaatgcaagggcaatagacagacctcttagaccgtta
ttcccaaaaggatatagaaatgatgttcaggtagtgtgtacagtattatctgtagatcag
gataatttacccaatatagtggctatgaatggagcatctttagcactttgtatatcaagt
attccttttataactcctgtaggctctgtagctgtggggttagtggatgggaattttata
ataaatcctaatttggaggatagagaaaaaagtactttgaatcttactgtatgtgctact
aaagagagggtcatgatggtagaagctggagcatgtgaagtgccagaggatattatgtat
gacgccataatttttggttttgaggaatgcaagaaaatagccttatttcaagaagaggtt
atgaaaaaatatggtaagaaaaaagatgaacctgatttatataaggtaaatgaagattta
gaagaagaggtaagaggatttgcttttgatatgataaaagatgctatgtatatagtagat
agggatgagagaaataaggttttaaaagatattgatgaaaaattagaagagcagttttct
gaagattatgcagataataaaagtgacatagctgatgtagtgtatagagtaaaaaaggaa
atagttagaggtatgctgcttaaagaacatagaagagtagatggaagggaatttgatgag
gtacgtcctataagctgtgaagtaggatttcttccgagggcacatggcacagggttgttt
actagaggattgactcaggtgatgactgttgttacattgggatctttaggtgacgtacaa
atacttgatggagtgggtcttgaggattctaaaagatatatgcatcattataattttcca
tcttacagcaccggggaagttagacctctaagaggacctggaagaagagaaataggccat
ggcgcattggctgagaaagcactggaaccacttataccaatggaagaacaatttccttat
accataagacttgtatcagaagttctaagttccaatggttctacatctcaagctagtata
tgtggaagtacactggcacttttagatgcaggtgttcctataaaaagacctgcggctgga
atagctatgggacttgtaaccagtgaagacttatctcaggaagaaatattaacggatata
cagggattggaagactttttcggtgatatggattttaaagttggaggaacggaaaaaggt
atcacggctattcagtttgatactaaaattcacgggttatccaataagtgtataaaagaa
actcttgaaaaagcaagaacagctagattatatatacttgagaagatgaaacaatgtatt
ccagagcatagggcagaagtatcaaaatatgcaccaaagacctatataatgtctatacct
cctgataaaataagagatgtaataggatccggaggaaaagttatcaataaaataatagca
gaaactggagttaaaatagatataaaagaagatggaaaaatatttgttatgtcggaagat
agtgaaggtgctaaaaaagcattgaaaataatagatgatcttactagggagatactggtg
ggggaaatatatttgggcaaggttactaaaataactaactttggagcttttgtggaaata
cacaagggaaaagaaggactagtccatatatcaaagttagattttacaagagttaataaa
gtagaagatatagtttctgtaggagatgaaatattagttaaagtaattgaaatagataat
cagggaagaataaatctttccagaaaagatgctataaaggattcagaaaagaaagaacaa
aatgagaaggatgtacaaaaaaagtag
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