Clostridium kluyveri DSM 555: CKL_1765
Help
Entry
CKL_1765 CDS
T00564
Name
(GenBank) Conserved hypothetical protein with LexA domain
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ckl
Clostridium kluyveri DSM 555
Pathway
ckl03420
Nucleotide excision repair
ckl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ckl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CKL_1765
03430 Mismatch repair
CKL_1765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ckl03400
]
CKL_1765
Enzymes [BR:
ckl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKL_1765
DNA repair and recombination proteins [BR:
ckl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CKL_1765
MMR (mismatch excision repair)
Other MMR factors
CKL_1765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S24
UvrD-helicase
HSDR_N_2
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_22
AAA_30
ResIII
SLFN-g3_helicase
NACHT
AAA_29
Motif
Other DBs
NCBI-ProteinID:
EDK33807
UniProt:
A5N926
LinkDB
All DBs
Position
complement(1866365..1868812)
Genome browser
AA seq
815 aa
AA seq
DB search
MQLNVEQKKLVQLRPSGHSLIRGVAGSGKTTVAVNRISFLLNHYCFEKQDRILVITFNRT
LINYIKYIYEKIQEEDNIDFQSLFQVDSSKVEIYNIDKVVYKYYKKYSKNNRVKYDLADN
NVKYTLINESIAQMGKVFKEISILDIKNSQFLLDEIEWIKACNYMELEEYQNVDRIGRTL
KKSGESPQKLMKNSEIRRVIFELMTLYNKKLRKSGHIDFGDMALMALEEAKSNVVKKYTH
IIVDESQDLTRTQLEFLKNLYLQKEYSSFMFVADTAQSIYTHSWLVKGRSFASIGFDMTG
KSNILSKSYRTTTQISQAAYSLIEKDINIVEDDNYVKPSLIDKQGSYPVYGGFASEKEQS
IYIIKQINTLCRKYSLRDIVIVAKNRTILNNMKRNLEQNKIPNILVSKNDENFDSDNIKL
ITMHSIKGLEFKVVIIVGLNEGTIPHISYGGSEEQKIQESIERKLLYVGMTRATEKLYLT
SSGKPSRFIEDINPKFLKIKDNCRLSKLYKVDLDKYYFKDVILDLYSNEEKVRQWFLREL
QQTYKYPEDLLKVEYKINSFSKIGFADVCVQIYSNDTQVPYILAEVKTSGMPLSDALSQL
KSYMSNCSSCQYGLVTNGFQCIVINKDFEEISDVPEFNVNMLPQNTENYKYMDLKHDKKF
TITFDSDSFHEIIVKDNDEEEQYTAEDLSSFKIYNSIASGSPIFMNSNYEDLLRLPVHWF
NNNEEHFVLKVKGDSMIEANIDNGDLVVIKKQNAADNRDIVAVAIDMENATLKRFRKMGD
TVLLIPENEEYEPIQVRSNQVKILGIVVGIMKKCS
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaatgtagaacaaaagaaattagttcaattaaggccttctggtcatagtctt
ataagaggagtggcaggctcgggaaaaactacagtggcagtaaatagaatatcattttta
cttaaccactattgttttgaaaaacaggatagaatattggtaataacttttaatagaact
ctcattaattatataaagtatatatatgaaaaaatacaagaggaagataatattgatttt
cagagtttatttcaagtggattcctctaaagttgaaatatataatatagataaggttgta
tataaatattataaaaaatatagtaaaaataacagagtgaagtatgatttagctgataat
aatgttaaatacaccctaattaatgaatctattgcacaaatgggcaaagtttttaaagaa
atctcaatattagatataaaaaattcccaatttttattagatgagatagaatggattaaa
gcctgtaactatatggaattggaagaatatcaaaatgtagataggataggaagaacctta
aaaaagagcggcgaaagtcctcaaaagctcatgaaaaattccgagataagaagagtaata
tttgaacttatgacactctataataaaaaattaagaaaatcaggacatattgattttgga
gatatggctcttatggctttggaagaagccaaaagtaatgtggtgaaaaagtatactcat
ataatagtagatgaaagccaggatcttacaagaactcaattggaatttttaaaaaatctt
tatttgcaaaaagaatattcaagttttatgtttgtagcagatactgctcagagtatatac
actcattcatggcttgtaaaggggagaagttttgcaagtatagggtttgatatgactgga
aagagcaatatcttatctaaaagttacaggaccactacacaaatatctcaggctgcttac
agcttgatagagaaagacataaatattgtggaggatgataactatgtaaaaccttcattg
attgataagcaaggttcatatcctgtatatggagggtttgctagtgaaaaggaacaatcc
atttatataataaaacaaataaatactttgtgcagaaaatacagtttaagagatatagta
atagtcgcaaagaatagaactatattaaataatatgaaacgtaatttggagcagaataaa
atccccaatattctggtaagtaagaatgatgaaaattttgacagtgacaatattaaactt
ataactatgcattccattaagggattggagtttaaagtagttataatagttggcttaaat
gaaggtactataccgcatatttcttatggcggttcagaggaacaaaaaatacaggaatca
atagaaagaaagcttttatatgtgggtatgaccagggccacggagaaattgtatttaacc
agcagtggaaaaccttccaggtttatagaagatataaatcctaaatttttaaaaataaaa
gataactgcagactaagtaaactatataaagtagatttggataaatattatttcaaagat
gttatattagatctgtattccaatgaagaaaaagttagacagtggtttttaagagaattg
cagcaaacttataaatatcctgaagacctattaaaagtagaatataaaattaatagtttt
tctaaaattggatttgcagatgtgtgtgtacaaatatatagtaatgatacacaagtaccc
tatatattggctgaagttaagacttcaggaatgccattgtctgatgcactaagccagttg
aaaagctatatgagtaactgcagcagctgtcaatatggattagttactaatgggtttcag
tgcattgtaataaataaagattttgaagaaataagtgatgtacctgaatttaatgtaaat
atgcttcctcaaaatacagaaaattataaatatatggatttgaaacacgataaaaagttc
acaattaccttcgattcagatagttttcatgaaataattgtaaaagataatgatgaagaa
gaacaatatacagcagaagatttaagttcatttaaaatatataatagtatagcatctgga
agtccaatttttatgaattcaaattatgaggatttattaaggctgccggtacattggttt
aataataatgaagagcattttgtgcttaaagtaaaaggagacagtatgatagaagccaat
atagataatggagatttagtggttataaaaaaacaaaatgctgcggataaccgtgatatt
gtggcagttgcaatagatatggaaaatgccaccttaaaaagattcaggaaaatgggagat
acagtacttttaataccggaaaatgaagaatatgagccaatacaggtaagaagcaatcag
gtaaaaatacttggaatagttgtgggaataatgaagaaatgcagctaa
DBGET
integrated database retrieval system
