Clostridium kluyveri DSM 555: CKL_2529
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Entry
CKL_2529 CDS
T00564
Name
(GenBank) Predicted helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ckl
Clostridium kluyveri DSM 555
Pathway
ckl03420
Nucleotide excision repair
ckl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ckl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CKL_2529
03430 Mismatch repair
CKL_2529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ckl03400
]
CKL_2529
Enzymes [BR:
ckl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKL_2529
DNA repair and recombination proteins [BR:
ckl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CKL_2529
MMR (mismatch excision repair)
Other MMR factors
CKL_2529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
PhoH
DEAD
UvrD_C
UvrD_C_2
SLFN-g3_helicase
Viral_helicase1
AAA_30
ResIII
AAA_11
AAA_16
NACHT
Cystatin
Motif
Other DBs
NCBI-ProteinID:
EDK34541
UniProt:
A5N095
LinkDB
All DBs
Position
complement(2605245..2607488)
Genome browser
AA seq
747 aa
AA seq
DB search
MNRNDVKWKLENEWLQEVLKEVRKQFNEKHNFKERFKKDAIKTQRELWQDIGSVSVSNGL
EQIVDFMQFINTMKIEKRGHEFTRKLEKKYERMLLSPYFGRIDFLEKGDKKAEKCYIGIS
NLINDNYDILIYDWRAPISSMFYDYEIGEASYECPEGIVDGKLTLKRQYKINNGKIEYMF
DSNLKIDDEVLQDILSKSTDSKMKTIVTTIQREQNKVIRNEEYKNLIVQGPAGSGKTSVA
LHRIAYLLYKQRDKIKPQNIVIFSPNGIFNDYISNVLPQLGEDNMYQTTFKEYMHMALGS
ELIKENYCEMMEYILVSKKQDSYQKRISSIKFKSSMEFLDILKRYVSYLEKMDRNFTDII
FRGNLIISSKDIQELFFKDYVKLPLKRRLEKIRERILFLVEPYKKLRIEEVASELKDSDS
YIDKVEIMKRSTHVVKEEMKNIYYEINRMTELDLVDIYKKLFEKLEFFYASSNTKYRETE
IDKIKSYTLEKLKTRILNYEDQPPLLYLKGAIGDLPKTSEIKYVIIDEAQDYTPLQYEIF
HQLFQSASITILGDLHQSINPFMNVGDYSNISNIFSKDDTCIINLTKSYRSTIEITKFSR
RLLNKEISGECVERSGDDPLLLGFIDEGAIKERLLEDVKIYNEKGYKSIGIITRTVKEAE
EVYSFLKGKVHVKSIMKDDEYVSDTLVIPSYLSKGLEFDVVLIYNAGDGNYSCEEERLLL
YTACTRALHALCIYYSGKITPLLKGSY
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaatgacgttaaatggaagcttgaaaatgaatggctgcaggaggtgcttaaa
gaagttagaaaacagtttaatgaaaagcataattttaaagaaagatttaaaaaggatgcc
attaaaacacaaagggaactgtggcaggatataggttctgtttccgtaagcaatggactg
gaacagattgtagattttatgcaattcattaatacaatgaaaatagagaagagaggccat
gagtttaccagaaaacttgagaaaaaatatgagagaatgcttttatcaccctattttgga
agaattgatttccttgaaaagggagataagaaagctgaaaagtgttatattggaatttca
aaccttattaatgataattatgatattctcatatatgactggcgtgcgccaatttctagt
atgttttatgattacgaaattggagaggccagctacgaatgtcctgaaggaattgtagat
gggaagctcacactgaaaagacagtataaaattaataatggtaaaattgagtatatgttt
gacagcaatcttaagatagacgatgaagtgctgcaggatatcttgagtaaaagcactgat
agtaaaatgaagacaatagtaacaactattcaaagagagcagaataaagtaattcgtaat
gaggagtacaaaaatctgattgtccagggtcctgctggaagcggaaagacctctgttgct
cttcatagaattgcctatctcctatataaacagcgggataaaataaagcctcaaaatata
gtgatattctctccaaatggtatttttaatgattatatttccaatgtattgccacagctt
ggagaagacaatatgtaccagactacgtttaaggaatatatgcatatggccttaggcagt
gaacttataaaggaaaactattgcgagatgatggaatatattcttgtttctaagaagcaa
gattcttaccaaaagagaatcagcagtataaaatttaagtcttctatggaatttttagat
atattaaaacgatatgtatcgtatcttgaaaagatggatagaaattttacggatattatt
ttcagaggtaatttgataatttcctctaaggatatacaagaattattttttaaagattat
gtgaagcttccgctgaaaagaaggcttgaaaagataagagaaagaattttgttccttgta
gagccttataaaaaactgcggatagaagaagtggctagcgagcttaaggattcggattct
tatatagataaagtagaaattatgaagagaagtacacatgttgtaaaggaagaaatgaag
aatatctattatgaaatcaataggatgacagaacttgatttggtggatatttataaaaaa
ctttttgaaaaacttgaatttttttatgcaagttcaaatactaaataccgtgagacggaa
attgataaaatcaaaagttatactctagaaaaactaaagactcgaatacttaattatgag
gatcagccgcctcttctatatttaaaaggtgccattggagaccttccaaagacttcagaa
atcaaatatgttattattgatgaagcacaggactatacaccgttacagtatgagatattt
catcagcttttccagtctgctagtatcaccatactgggtgatttacaccaatcaatcaat
ccgtttatgaatgtaggagattatagtaatatatccaatatattttcaaaagatgatacc
tgcataataaacttaactaaaagctacagatcaacaatagaaattactaagttttcaaga
aggctgcttaataaggagatttctggtgaatgcgtagagagaagtggagatgatccctta
cttcttggattcatagatgaaggagccataaaggaaagacttcttgaggatgtaaaaata
tataatgagaaaggttacaaatcaattggtattataacaaggaccgtaaaagaagcagaa
gaggtatacagtttcttaaaaggtaaggttcatgttaaatccataatgaaggatgatgaa
tatgtaagtgataccttggtaattccgtcttacctttctaaaggattagaatttgatgtg
gtgcttatatataatgcaggagatggaaattatagttgtgaggaggaaagactgctgctt
tatactgcctgtactagagcacttcatgctttatgcatatactattctggtaagattaca
ccattgctgaaaggaagttattaa
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