Clostridium kluyveri DSM 555: CKL_3438
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Entry
CKL_3438 CDS
T00564
Name
(GenBank) Predicted signal transduction and transcriptional regulator protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ckl
Clostridium kluyveri DSM 555
Brite
KEGG Orthology (KO) [BR:
ckl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ckl03000
]
CKL_3438
Transcription factors [BR:
ckl03000
]
Prokaryotic type
Helix-turn-helix
Other families
CKL_3438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
PAS
Mg_chelatase
AAA_5
PAS_9
AAA
PAS_2
AAA_2
PAS_4
PAS_10
HTH_50
Diguanyl_cycl_sensor
HTH_7
HTH_30
AAA_3
Motif
Other DBs
NCBI-ProteinID:
EDK35440
UniProt:
A5N2U4
LinkDB
All DBs
Position
complement(3488754..3490733)
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AA seq
659 aa
AA seq
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MDNYITSFDNNTLYKNEKVWFNLVENKIVDRDVLRNDIAASWERCINSQVDPLKRNSGNI
IYDLRDMLEQEKNNLLFKIAEPFMKNLYEVIKPLGFIAMLGNEDGINIDMGGNKKMMSIA
EKINAVKGASFEEKYIGTNAASICSVEKRVAQVTYYEHYKANMHNWCCSSVPIFNKEGNM
IAVINVSNMDTSKHTPLLISLIASTARLIEMKFKLYDANDIYNQNYWFLKESMKKNPRAL
LFLDNNGCINHINENAVEMLGVSTKESIGRHLSEVFDKKYIKNDKMDVGSNVKNIILEDR
NRNKTYLKLSKILSSDKYHLGYVGIIEQPVKNSGNHHKAKYSFEDIKYNCSKMDKEIKKA
KRAAYNDMVVFINGESGTGKELFAQAIHNYGKRCNGPFIAVNCGALPRELIQSELFGYEK
GAFTGAKKEGQPGKFQLAQKGTLFLDEIGDMPMELQANLLRVLQEKTVTPLGSNEIIELD
VRIITATNKDLLLEVEKGNFREDLYYRISGINIDVPPLRERGKDVEELFYKFLDKYASDV
CEYKNIKVTDEFIRALCEYKWPGNVRELENMVISILNNLEDSCIGVEDLPAKILKCIKVE
GNTKPENDGMYLKSLDSTEMINIEQTLKRCNNNISKSAKSLGITRATLYRKIDKYKIKI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggataattatattacttcatttgataacaatacattatataagaatgaaaaggtatgg
tttaatctagtagaaaataagatagttgatagagatgtattgagaaatgacattgctgct
tcctgggaacgatgtataaattctcaagttgatcctttgaaaaggaatagtggtaatata
atttatgacttgagggatatgttggaacaggaaaaaaataatttgctttttaagattgca
gaaccatttatgaaaaatttatatgaagttataaaacccctggggtttattgctatgttg
ggaaatgaagatggtataaacattgatatgggtggcaacaaaaaaatgatgtctattgct
gaaaagatcaatgcggtaaaaggagcctcatttgaagaaaagtatattggtacgaatgct
gccagcatatgttctgttgaaaagcgagttgctcaggttacttattatgaacattataag
gccaatatgcataattggtgctgttcatcagttcctatttttaataaagagggtaatatg
atagcagtaattaatgtatctaacatggatacaagcaagcatacacctctgctaatcagc
ttaatagcttctactgcaagattaattgaaatgaaatttaaattgtatgatgccaatgat
atatataatcaaaattattggtttttaaaagaatctatgaaaaaaaatcctcgagcatta
ctgtttttggataataatgggtgtatcaatcatatcaatgaaaatgcagttgaaatgttg
ggcgtatccacaaaggaaagtataggcagacatctttccgaagtatttgacaagaagtat
attaaaaacgacaaaatggatgtaggaagtaatgtaaaaaacattatacttgaggataga
aatagaaataaaacatatcttaaattgagtaaaattttgtcatcagataagtatcatctg
ggttatgtgggtattattgaacaacctgtaaaaaacagtggaaatcatcataaggctaaa
tatagctttgaagatataaaatataattgtagtaaaatggataaagaaattaaaaaggct
aagagagctgcttataatgatatggtagttttcattaatggggaaagtggcactggaaaa
gaactttttgcacaggcaattcataattatggaaaacgatgtaatggtccatttatagca
gttaattgtggtgcactgccaagagagcttattcaaagtgagctttttggttatgaaaaa
ggtgcttttactggagcaaaaaaagaaggacagcctggtaagtttcaattggctcaaaaa
ggtactctttttcttgatgaaataggagacatgcctatggaattacaggcaaatttattg
agggtgctccaggaaaagacagttactcctctgggcagtaatgaaatcatagaattagat
gtgcgtattattacagcaactaataaagatttgttattagaggtagagaaaggtaatttc
agagaagatttatattatagaatatctggtattaatattgatgttccccctttaagagaa
aggggaaaagatgtagaagagttattttataagtttttggataaatatgcatctgatgtt
tgtgaatataaaaatataaaagtcactgatgaatttatacgggccttatgtgaatataaa
tggcctggtaacgtgagagaattagaaaatatggtcatatcaatattaaataatttagaa
gactcctgcataggtgtagaagatcttccagctaaaatattaaagtgtattaaagtagaa
ggtaatactaagccagaaaatgatggcatgtatttaaaatctttagatagtacagagatg
attaatatagaacaaactttaaaaaggtgtaataataatatctcaaaatcagcaaaatca
cttggtataactagagctacattatatagaaaaattgataaatacaaaataaaaatttag
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