Clostridium kluyveri DSM 555: CKL_3484
Help
Entry
CKL_3484 CDS
T00564
Symbol
pcrA
Name
(GenBank) PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ckl
Clostridium kluyveri DSM 555
Pathway
ckl03420
Nucleotide excision repair
ckl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ckl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CKL_3484 (pcrA)
03430 Mismatch repair
CKL_3484 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ckl03400
]
CKL_3484 (pcrA)
Enzymes [BR:
ckl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKL_3484 (pcrA)
DNA repair and recombination proteins [BR:
ckl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CKL_3484 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CKL_3484 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
CYP38_PsbQ-like
ResIII
Motif
Other DBs
NCBI-ProteinID:
EDK35475
UniProt:
A5N2X9
LinkDB
All DBs
Position
complement(3524690..3526927)
Genome browser
AA seq
745 aa
AA seq
DB search
MDLKNLLNKEQYEAVTTVEGPLLILAGAGSGKTRVLTYRIAHMIKDLNIYPSKILAITFT
NKAAGEMKDRIRKLVGDEVDSMWVSTFHSSCVRILRREIDKLGYNRNFAIYDSYDQKVLI
KQCMKELNMDDSITDKEIINRISRQKDNLISQDRFKKENEGNFRMNKIADVYVMYQKKLK
ENNALDFDDLIFKTVQLFKEHPDVLEFYQRKFKYIMVDEYQDTNKSQYEFIRLLAQVEKN
ICVVGDDDQCIYAWRGADVENILNFENDYINSKVIKLEQNYRSKANILKAANDVISNNFH
RKQKVLKTANDSGDKIKLYRATTDIDEGRYIASRIKEILNIDKDKHYRDFAVLYRKNVQS
RIFEDVFMKSNIPYRIIGGLKFYDRKEIKDILAYLKFINNPLDNVSLRRIINVPKRNIGE
ATIQKIQSFADSMDESIYNALLDIDKSMNLTQRSINSIKKFVSLINSFIKSRDKISVSEL
IKEILNTTGYLEELKHSKEPDSISRIENLKELVSAAVEFEVTSEDTSLSAFLEKVTLVSD
IDNFDNNADSVVLMTVHSAKGLEFPVVFMVGMENGIFPGIQSLDNPKEMEESRRLCYVGI
TRAKENVYMTFADTRRVFGKMVSYKQSDFIDEISDELKEYDNFRKSDINNFVNRSLSKNI
FSYGKKGILNNIPPKRESLSVDNIPQGNYLKPENIKEGIKVKHKKFGVGTIVSISKKDED
IKLTIVFDNMGIKNLMYGVVPLEAV
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaagaatcttttaaataaagagcaatatgaagcggtgacaactgtagaaggt
ccattattgattttagctggagcaggttctggcaagactagagttttaacttatagaata
gctcatatgattaaagatttaaatatatatccctctaaaatattggccataacttttaca
aataaggctgcgggagaaatgaaagatagaataagaaaactggtaggggatgaagtggac
agcatgtgggtatccacatttcattcaagctgtgtgagaatattgagaagagaaatagat
aagcttggatacaataggaatttcgccatatatgacagctatgatcaaaaagtactcata
aagcagtgtatgaaggaattaaatatggatgatagtataactgataaggaaataataaat
aggattagtaggcaaaaggataatcttatatcacaagataggttcaaaaaggaaaatgaa
ggcaattttagaatgaataaaatagcagatgtatatgtaatgtatcaaaagaagcttaaa
gaaaacaatgctttagattttgacgatcttatatttaaaacggtacagctttttaaagaa
catccagatgtacttgaattttatcagagaaaatttaaatatataatggtagatgaatat
caagacaccaataagtcacaatatgagtttataagattattagcccaggtagagaaaaat
atatgcgtagtaggggatgacgatcagtgtatttatgcatggagaggtgcggatgtagaa
aatattttaaattttgagaatgattatataaattccaaggttataaagttggaacaaaac
tatagatcaaaagccaatatattaaaggccgctaatgatgtgataagtaataattttcat
agaaagcagaaagtacttaaaactgcaaatgacagtggggataaaataaaattatataga
gctaccacagatatagatgaagggagatatatagcatcccggattaaggaaattttaaat
atagataaagataaacattatagggattttgcagtgctttatagaaaaaatgttcaatcc
cgtatatttgaagatgtttttatgaaatctaatataccttatagaattattggaggattg
aaattttatgacagaaaagaaataaaagatattttggcttatttgaagtttataaataat
cctttagataatgtaagtttgagaagaataataaatgtacctaagagaaatatcggagag
gctacaatacaaaaaatacaaagctttgcagattctatggatgaatcaatatacaatgcc
cttttagatattgataaaagcatgaatttgacacaaagaagtattaattccataaaaaaa
tttgtgagtcttataaatagttttataaaaagcagggataaaatttctgtatctgaacta
ataaaagagatattgaatactacagggtatttggaagaattgaaacactcaaaagagcca
gacagtataagtaggatagaaaatcttaaagaattggtatctgcagctgtggaatttgaa
gttacttcggaagatacgtctctttctgcatttttagaaaaggtaacactggtttccgat
atagataattttgataataatgcagattcagtggtacttatgacagtacatagtgcaaaa
ggtttggaatttcctgtagtcttcatggttggaatggaaaatggaatatttccaggaata
cagtccttagataatcctaaggagatggaagagtcaagaagactttgttatgtggggata
acaagggcaaaagaaaatgtttatatgacatttgctgatacaagaagagtatttggcaag
atggtatcttataaacagtctgactttatagatgaaatatctgatgaattaaaagaatat
gataatttcagaaaatcagatattaataattttgtaaatagatctttaagtaaaaatata
ttttcatatgggaaaaaaggaatcttaaataatatacctcctaaaagagaaagtttatct
gtagataatattcctcaaggtaattatttaaaaccagaaaatataaaagaaggaataaaa
gtaaaacacaaaaaatttggagtaggtactattgtgagtatatccaagaaggatgaggat
ataaagcttaccatagtttttgacaatatgggaataaaaaatttaatgtacggtgtagtt
ccactggaggcggtataa
DBGET
integrated database retrieval system
