Clostridium kluyveri DSM 555: CKL_3827
Help
Entry
CKL_3827 CDS
T00564
Symbol
dnaX
Name
(GenBank) DnaX
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ckl
Clostridium kluyveri DSM 555
Pathway
ckl03030
DNA replication
ckl03430
Mismatch repair
ckl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ckl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CKL_3827 (dnaX)
03430 Mismatch repair
CKL_3827 (dnaX)
03440 Homologous recombination
CKL_3827 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ckl03032
]
CKL_3827 (dnaX)
03400 DNA repair and recombination proteins [BR:
ckl03400
]
CKL_3827 (dnaX)
Enzymes [BR:
ckl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CKL_3827 (dnaX)
DNA replication proteins [BR:
ckl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CKL_3827 (dnaX)
DNA repair and recombination proteins [BR:
ckl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CKL_3827 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DnaX_C
RuvB_N
AAA_22
DNA_pol3_delta_C
AAA_18
AAA_5
AAA_30
DUF815
AAA_14
AAA_24
AAA_assoc_2
AAA_7
RNA_helicase
Mg_chelatase
RCF1-5-like_lid
AAA_28
ResIII
Motif
Other DBs
NCBI-ProteinID:
EDK35805
UniProt:
A5N3V9
LinkDB
All DBs
Position
complement(3877468..3879129)
Genome browser
AA seq
553 aa
AA seq
DB search
MSYTTLYREWRPKNFSDVVGQNHITVTLKNQILNNRVAHAYLFCGTRGTGKTSMAKILAK
AVNCLDIQQGEPCNECEMCKKINQGISMDVIEMDTASKRKLEDIKDVIENVKYPPQEGKY
KVYIMDEVHMLTQEAVNAFLKTLEEPPLNVIFILATTDPQKLPVTILSRCQKFDFRRIKS
SEIFNRLRAIVNEEGIFADDRSLNLISRICDGAMRDALSVLDQAISMGSGKVEYNSIVDM
LGLVTNENLFHLTDSIIEKNVELSMKVIDDIVLSGKDIYNFIKEMIVHLRNLLMVKVSNN
PEEILDISEENIELLKKQAQKIRVEEIMRHINIFQDAEEQSKWVKQSRIYLELAVIKMCK
IEYDTSKEIMLSRLNKLEEAFKQGGMKIFHEKIPSKELGISRDVIKKDNIIGEVNHHDNR
EKNLISKGTQSIIEENMYSKITLDIVKKRWKDILELFKSRHYMVLFAALTTGKIVNCEKG
VITIEYDKNYAFHKQRLEKQENIKIVEQIFSEILKEKVTVRYSIENDIQGNSPSREQLLK
DTFGEDIVEILDE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatactactctatatagagaatggagacctaaaaatttttcagatgtagtaggt
cagaatcatataactgttacattaaaaaatcaaatactgaataatagagtagcccatgct
tatttattttgcggaactagaggtacgggaaaaacttcaatggcaaaaatactagcaaaa
gcggtaaattgtttagatattcagcagggagagccttgtaatgaatgtgaaatgtgcaaa
aagataaatcaaggcatttcaatggatgtaattgaaatggatacagcatctaaaagaaag
cttgaagacataaaagatgtaatagaaaatgtaaaatatccaccacaggaaggtaagtat
aaggtatatataatggacgaagtacatatgcttacccaggaagctgtaaatgcattctta
aaaactttagaagaaccccctttaaatgtaattttcatacttgctactacagatccacaa
aagcttcccgtaaccatactttccaggtgtcaaaaatttgattttagaaggataaaaagt
tcagagatatttaatagacttagagctatagttaatgaagagggaatatttgcagatgat
agaagcttaaatttaatatctaggatatgtgatggtgctatgagagatgcactaagtgta
ttagatcaagccatatctatgggaagtggaaaagttgaatataatagtattgttgatatg
ttggggttagttacaaatgaaaatttatttcaccttacagatagtataatagaaaaaaat
gttgagttatctatgaaggtaattgatgatatagttttaagtggaaaagatatatataat
tttattaaggaaatgatagtacatttgagaaatttgctgatggtaaaggtatccaataat
ccagaagagattttagatatatcagaggaaaatatagaacttttgaaaaagcaggcacag
aaaatacgtgtagaagaaataatgagacatataaatatatttcaggatgccgaggagcaa
tctaaatgggttaagcagagtagaatttatctagagcttgcagtaataaaaatgtgcaag
atagagtacgatacatccaaagagataatgctttctaggttaaataaattggaagaagct
tttaaacaagggggaatgaaaatttttcatgagaaaataccttctaaagaattaggaata
tctagggatgtaattaagaaagataatataattggggaagtcaaccatcatgataataga
gaaaaaaatttgataagtaagggaacacaatctataatagaagagaatatgtattcaaaa
attacattagacatagtaaaaaaaagatggaaagatatacttgaattatttaagagtaga
cattacatggtattatttgcagcacttactacaggtaaaatagtaaattgtgaaaaggga
gtaataactatagagtatgataagaattatgcctttcataaacaaagactagaaaaacaa
gaaaatataaagatagtagaacagatattttcagaaatactaaaagaaaaagttacagtt
agatattctatagaaaatgatatacaaggtaatagtccatcaagagaacaacttttaaaa
gatacttttggagaagatatagtagaaatacttgacgaatag
DBGET
integrated database retrieval system
