Clostridium kluyveri DSM 555: CKL_4015
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Entry
CKL_4015 CDS
T00564
Name
(GenBank) SbcCD related DNA repair protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ckl
Clostridium kluyveri DSM 555
Brite
KEGG Orthology (KO) [BR:
ckl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ckl03400
]
CKL_4015
DNA repair and recombination proteins [BR:
ckl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CKL_4015
Archaeal homologous recombinant proteins
CKL_4015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
AAA_23
SMC_N
Metallophos_2
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABQ23614
UniProt:
A5F9P1
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Position
pCKL555A:complement(9316..13092)
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AA seq
1258 aa
AA seq
DB search
MKIAHISDIHLGEFPGPIVDGMNGRMKDIVTCMDYASNKLIEEQPDIILIVGDLFHRAKS
WGDEALKEISIASVWLRRLASIAPTVLLYGTGNHDNLNYFKNIRDMGIENLTIITEPDFF
TINTQSGDIQIAAVPGMDKGFFRTLYPGMDFTDENKAISEALGNVIVGISADAEPNIPCV
LMSHYTVTGCQLENGESVFLNSDVVLPTAALQASNYNLVCLGHIHRAQEVPNCGRPTFYS
GPLNGITFNEEGQDKGFWIHECVGEFGVFSKFFKTPSREFLTFKWVQQHLDFYMKNGIPK
GDIENIKDKIVRVIYSCDDETNKQFNRKELEKQLYAAGAFYVQEIRPSKILTTTDKQSMS
ENDSVMHNLKDYLKREEVPENDIKDILALAEPLINEIAASLPTGKLSGIFEPVTLEVKNY
RSYKEESFDFSKVNFATVNGPNGIGKSSFFMDAISDCLYEEPREGELTGWINNGENVRSG
SITFSFLMGADKWRVIRTRAKAGKTTLALQKWHKNKWEDHSENKKDDTQKKIVNLLGMDS
MTFKSCALIMQDQYGLFLEADKTERMQVLGNILGLSVYDRLHELVKDKLRVHNREVEKLR
SSIEILTEKLSMKNETEQQLKEYELKKSEISDKILQGEKKAQDLEENLKKFNILDVKIKA
LTDKIVALDNGINIKKDEISTLEFEVDEAQKIVDKEDIILAKIKEYEEAKESIAVLNVQK
IEFEQAKIQLGEVKNNICELQKKSYINDVDIENLKVELKNKNELEKEVSNLTKLEEKLAG
LDKMRTKKEESLQKAQKLKQKVLLLESEYEKKTDKIQEQIFNCKKKAKLINDSNCPVNNP
SCNFLKDALEAKNKIPELEKQLKKFDYSEVEKADMDFQQAKMVYSHFDYNSKLHEETKKE
FEVLRKKKEQLLSLQGKNELLENSMKQREDIDARIEELEIKRVELDLKIQNFKTGMELLS
KLEKELPVLEHWYKGKDELPKAKQILESSIERIGILKTDIEKTNTNIKAIEADRDKLAVE
RAYLDGIEELLRDAKSNIASLQTGKSDIDFNIGAYKSKLDELKNYEVERKEKTTQLAKLA
RVVSQLNILVQAFSIDGIPFQIVRSVVDELSAKSNEILSQMTGGKMSIEFKMDKVLKNKK
EVNALEIWINDYQRGTMPYLSRSGGQKVKAALSVAFALADLKANRAGIQLGMLFIDEAPF
LDIEGVQAYCDALETIHERYSDMRLLAISHDPTFKGRFPQSIDVIDSGEQGSKIIFNE
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagcgcacattagtgatattcatttaggagaatttccagggccaatagtggat
ggcatgaacggaagaatgaaagatattgttacttgcatggattatgcatcaaataaatta
atagaagagcagccagatattattcttatagttggcgatctattccatagagctaagagc
tggggagacgaggctttaaaagagataagcattgcatctgtatggcttagaagactagca
tccatagcaccaacggtacttttatatggaaccgggaatcatgataacttaaattatttt
aagaatataagagatatgggcattgaaaacttaactataataactgaaccagattttttc
acaataaatactcagtcaggagatattcaaatagcagcagtgccgggaatggataagggc
tttttcagaactttatatcctggcatggattttacggatgaaaataaggccattagtgag
gcactaggcaatgtgattgtaggaatcagtgcagatgcggaacccaatattccttgtgtc
ttaatgtcacattacacagttacagggtgccaattagaaaacggagaaagcgtattcctc
aacagtgatgtagtgttgcctacggcggcactacaggcttcaaactataatttggtttgt
cttggccatatacatagggcacaggaagttccgaactgtggcaggcctactttctatagt
ggacctttaaacgggataaccttcaatgaagaaggacaagacaaaggattctggatacat
gaatgtgttggtgaatttggtgtatttagtaaatttttcaaaacaccttcaagggaattt
ttaacctttaaatgggtgcaacaacacttagatttttacatgaaaaatggtattcctaaa
ggggatatagagaacataaaggataaaattgtgagggttatttatagttgtgatgatgaa
acaaataagcagttcaatcgtaaagaattggaaaaacaactttacgctgcaggtgcattt
tatgtccaggagataagaccctctaaaattcttaccactacagacaaacaatccatgagc
gaaaatgattcggtaatgcataatcttaaagattacttaaaacgtgaagaggtaccggag
aatgatataaaagatattttagcattggcagaacctttaattaatgaaatagcagcttct
ttgcctactggaaagctttcagggatatttgaaccagtgacactggaagttaaaaactat
aggagctataaggaagaaagttttgattttagcaaagtaaatttcgccactgtaaatggt
cctaatggtattggaaaaagttccttcttcatggatgcaatttctgattgtttatatgag
gaaccaagagaaggggagcttacagggtggataaataatggtgaaaatgtaagatcagga
tctattacattttcattcttaatgggagctgataaatggagagtaataaggaccagggcg
aaagcagggaagactacccttgcacttcaaaaatggcataaaaataaatgggaggaccat
tcggaaaacaaaaaagatgatacccaaaagaagatagtaaatcttttaggaatggactcc
atgacatttaaaagctgtgcccttataatgcaggaccaatacggattatttctggaagca
gataagacggaacgtatgcaggtgctaggtaatattctaggtttaagtgtatatgatagg
cttcatgaactggtaaaggataaattgagggtgcataacagagaagttgaaaagcttaga
agcagtattgagatacttactgaaaagttaagcatgaagaatgagacagagcagcaatta
aaagaatatgaattaaaaaagtcagaaatttcagataagattttacagggagaaaagaaa
gcccaggacctggaagaaaatcttaagaaatttaatatattggatgtaaagattaaagcc
cttacagataagatagtcgccttagacaatggaataaacattaagaaagatgaaatatct
accttggaatttgaagtagatgaagctcaaaagatagttgataaggaggatataatccta
gctaaaatcaaagaatatgaggaagctaaggagagtatagcagtccttaatgttcaaaaa
atagagtttgaacaggctaaaattcaactaggcgaagttaaaaataatatatgtgagctt
cagaaaaaaagttatatcaatgatgtagacatagaaaacttaaaagtcgaacttaaaaat
aaaaatgagcttgaaaaagaagtttccaatctaactaaactagaagaaaaactagcaggt
ttagataaaatgaggacaaaaaaagaagaatcattacagaaagctcaaaaattaaaacaa
aaagttctgcttttagaaagtgaatatgaaaagaaaacagataaaattcaggaacaaatt
tttaattgtaaaaagaaagccaaattgattaatgatagtaattgtccagtcaataatcct
tcatgtaactttttaaaagatgcgttagaagctaagaataaaattcctgaattagaaaaa
cagttaaagaaatttgactattcagaggttgaaaaggctgatatggactttcaacaggca
aaaatggtttatagtcattttgattataattctaaactccatgaggaaactaaaaaagaa
tttgaagttttaagaaagaaaaaagagcagttattaagtttacaaggcaaaaatgaactt
cttgaaaatagcatgaagcaaagagaagatattgacgcaaggattgaagaattggaaata
aagagagttgaacttgatttaaagattcagaatttcaaaacaggaatggagcttcttagt
aagctagaaaaggaattaccagtattggagcattggtataaaggtaaggatgaacttcca
aaagctaaacaaattcttgaaagttcaattgaaagaataggtatcctaaaaactgacatt
gaaaaaaccaatacaaacataaaagctattgaagctgacagggataaattggctgtcgaa
agagcctaccttgatggcatagaggaattattgagggatgcaaaatcaaatattgcatca
ttgcagactggcaaaagtgatattgatttcaatattggtgcctataaatctaaacttgat
gaacttaaaaattatgaagttgagagaaaagaaaaaacaactcaattagcaaagttggca
agggtagtatctcaattaaatatattggttcaggctttctctatagatggtattccgttt
cagatagtcaggtctgtagtggatgaattaagtgccaagagcaatgaaatattaagccaa
atgaccggaggaaaaatgtccattgagtttaagatggataaggttcttaaaaataaaaaa
gaagtcaatgcccttgaaatatggataaatgactatcagaggggaactatgccatattta
agcaggtcgggaggacagaaggtaaaggcagctctttcggtggcttttgcacttgcagat
ttaaaggctaatagggcaggaatacagttaggtatgttatttattgacgaagctcctttt
ttagatatagaaggcgttcaggcatattgtgatgcattagaaacaatccatgagagatat
tcagatatgagacttttggccatatctcatgatccaactttcaaaggtaggtttcctcag
tctatagatgttattgattcaggtgaacagggtagcaagattatttttaatgaataa
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