Clostridium kluyveri DSM 555: CKL_4034
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Entry
CKL_4034 CDS
T00564
Name
(GenBank) DNA polymerase III, epsilon subunit related exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ckl
Clostridium kluyveri DSM 555
Pathway
ckl03030
DNA replication
ckl03430
Mismatch repair
ckl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ckl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CKL_4034
03430 Mismatch repair
CKL_4034
03440 Homologous recombination
CKL_4034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ckl03032
]
CKL_4034
03400 DNA repair and recombination proteins [BR:
ckl03400
]
CKL_4034
Enzymes [BR:
ckl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CKL_4034
DNA replication proteins [BR:
ckl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CKL_4034
DNA repair and recombination proteins [BR:
ckl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CKL_4034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DEDDh_C
DUF3272
Motif
Other DBs
NCBI-ProteinID:
ABQ23633
UniProt:
A5F9M6
LinkDB
All DBs
Position
pCKL555A:20363..21688
Genome browser
AA seq
441 aa
AA seq
DB search
MNNSTASKSDDLQHELEQYSQSLIKAKRNAKIFGILEFIFLIPGFMNPVLAIFVFIFAIL
FFSNYIKSKKITKIINSLNNNTNKTIVSTNKENIIPKNLSNNINKPDDIYLKKLTGKNKS
INKSQGVFDNFVVVDLETTGLEPTRDYIIEIAAAKYENNEIIDTYTTLVNPEVFIPPNIT
NINHIDNDMVKDCPEIKEVLPGFMNFIGQLPLVAHNAPFDIKFLNANLALLGLYLNNPII
DTLPISRKLFSEIENHKLGTIKEYLNIDVQDSHRALPDCYVCGQIYLEYSTKEKNKKALA
NIKLHSDIGLNKEECYSIVKEILKKHNKDLTYVRYGFTSNYFDIRAFYNFLRLKLKGKKY
YALLDNSLAEINSMIPDLTLKYEVAPKSESNKIRILINSPEDLYILEPIIIQAFDKCIDS
MEYYRNNVSVAEKNIAEYLNT
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaacaattctacagcgtcaaagtcagatgatttacaacacgaactagaacaatatagc
caatctttaataaaagctaaaagaaatgcaaaaatatttgggatcttagaattcattttt
cttattcctgggtttatgaatccggtactagctattttcgttttcatctttgctatactt
ttcttttctaactatattaaatcaaaaaaaatcaccaaaataattaattcactgaataat
aatacaaacaaaactattgtttcaaccaataaagaaaatatcatacctaaaaatctttca
aataatataaataaaccagatgatatttatttaaaaaagcttactggtaaaaacaaaagt
attaataaatctcaaggtgtatttgacaattttgtagttgttgacctagaaactacgggg
ttagaaccaacaagagattatatcattgaaatagctgcagccaaatatgaaaataatgaa
attatagatacatatactacattggtaaatcctgaagtttttattcctccaaacataact
aatataaatcatattgataatgatatggtaaaggattgtcctgaaataaaagaagttctt
cctggttttatgaactttattggacagttacccttagtagcacataatgctccttttgac
ataaaatttttaaatgccaatcttgcacttttgggcttgtatttaaataatcctataatc
gacacattgcctattagtcgaaaactattttctgaaatagaaaaccataaattaggcaca
ataaaggaatatttaaatatagacgttcaagatagccatagagccttaccagattgttac
gtttgtggccagatatatctagaatactccactaaagaaaaaaataaaaaagcacttgct
aatatcaaacttcattctgacatagggttaaataaagaagaatgttattccattgtaaaa
gaaatactaaaaaaacataataaagacctcacgtatgtacggtacggctttactagcaat
tattttgatataagagcattttataactttctaaggttaaagctaaaaggcaaaaagtat
tatgctcttctagacaattcacttgcagaaattaatagcatgattcctgatttaacttta
aagtatgaagtcgctccaaaatctgaatcaaataaaataagaatacttattaattcacca
gaagatttatatattcttgaacctataatcatacaagcatttgataagtgcatagattct
atggaatattacaggaacaacgtgtcagtggctgagaaaaatatagctgaatatctaaat
acatag
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