Caldicellulosiruptor kronotskyensis: Calkro_0108
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Entry
Calkro_0108 CDS
T01357
Name
(GenBank) extracellular solute-binding protein family 1
KO
K10117
raffinose/stachyose/melibiose transport system substrate-binding protein
Organism
ckn
Caldicellulosiruptor kronotskyensis
Pathway
ckn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Calkro_0108
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ckn02000
]
Calkro_0108
Transporters [BR:
ckn02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
Calkro_0108
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
SepRS_C
Motif
Other DBs
NCBI-ProteinID:
ADQ45024
UniProt:
E4SCG9
LinkDB
All DBs
Position
156239..157561
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AA seq
440 aa
AA seq
DB search
MSKRTLKVFISVLLVTVMIVSLLAGFQGTFTASASTKKTVEIKFFSNLPDRTSNQGKLEQ
MLIDSYMKANPNVKIKVEALQDEPYKQKFKVYVATNQMPDIFMVWGQPSFFLPVMKGGYA
AEIKPEQIKNYGFKTSSLKDFMYNGKIYGLPRNTDFMVLYYNKGLFSKYNVKVPTTFSEL
LDAAKVFRKNGIAPIAINGKDKWILAILYQELVVKESGDQKLIYDAISKKSVSKNQILLK
AAKDLVELVNVGGFQDAFVAADYGAANNLFAQEKAAMYYMGSWEVGMAANPNFSDSFKKN
VDATYFPIISGGKGKKTDILAWHGGGYAVSANSKVKNEAMKLLLYMMHPTRWAKIGWQQG
LVVPGQNWEKFMTGKETVLQKKLTQIFSSATSVSGTVWQDAFTPNFKTEAETLCQMLVAK
AITPEKFLSKIEELAKLEVK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagagaaccttaaaagtatttatttcggttttacttgtaacagtaatgatcgtt
agcttattagcaggttttcaaggtacttttacagcttctgcatcgactaaaaaaacagta
gaaatcaaatttttctccaacctaccagataggacgtctaaccaaggcaaacttgaacag
atgttaattgacagctatatgaaagcaaatcctaatgtcaagattaaggttgaagcactt
caggatgaaccttacaaacaaaagttcaaagtttatgttgcaacaaatcagatgccagac
atttttatggtatgggggcagccatctttcttcttgccggttatgaaaggtggatatgca
gctgaaataaagccagaacaaataaaaaactatggttttaaaacatcatcgttaaaagat
tttatgtataatggcaaaatatacggacttccaagaaatacagactttatggtgctctat
tataacaaaggactgttcagtaaatacaatgtaaaagtaccaacaacatttagtgagctt
ttggatgcagcgaaagtattcaggaaaaatggaattgctccgattgcaataaacggtaaa
gataagtggatactggcaattctgtatcaggagcttgttgtgaaagagagcggagaccaa
aaattaatttacgatgcaatttcgaagaaatctgtatccaagaaccagattcttttaaaa
gctgcaaaagacttagttgagcttgtgaatgtaggtggatttcaggatgcatttgttgca
gcagattatggagcagcaaacaacttatttgctcaagaaaaagcagcaatgtactatatg
ggttcatgggaagttggaatggcagcaaatccaaacttctctgattctttcaaaaagaat
gttgatgcaacatacttcccaataatatcaggtggcaagggcaaaaagacagatatatta
gcatggcacggcggtggatatgcagtctctgcaaactcaaaggttaagaatgaagcaatg
aaacttcttctttacatgatgcatccaacaagatgggcaaagattggttggcagcaggga
cttgttgttccaggacagaactgggaaaagtttatgacgggaaaagaaacagttctccag
aaaaagctgacacagatatttagcagtgcaacatctgtaagtggtacagtatggcaagat
gcgttcactccaaacttcaagacagaggcagagacactttgccagatgcttgttgcaaag
gctattacacctgaaaagttcttgtcaaagattgaagaacttgcaaagttagaagttaag
tag
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