Caldicellulosiruptor kronotskyensis: Calkro_0225
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Entry
Calkro_0225 CDS
T01357
Name
(GenBank) transcriptional regulator, AraC family
Organism
ckn
Caldicellulosiruptor kronotskyensis
Pathway
ckn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Calkro_0225
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DNA_pol_A_exo1
DUF4411
GGDEF_2
TetR_C_39
GGDEF_GdpP
Motif
Other DBs
NCBI-ProteinID:
ADQ45137
UniProt:
E4SD73
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Position
317949..320270
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AA seq
773 aa
AA seq
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MFKKILWRFVFSYLVIFIIPLLIGIGSYFSIKDIMMSSLYRYNKTALTQLEDKVENEIVK
SVESLADWINLNPYYFIFLPEAKEALDSSDRLLNIRNLCREIYSQTYKNSYIIDAFIYIP
SENLIVGPSYTTTPYNYYTYINRPLDMSYEKWLEFLSGEYKMKYIPSFKIKADYKNLSTI
VFANTLSRWIIDGKNANVFVIIDQSKIVSTMKEIVSYPKGILWILDRDNNQVLKVSAEKQ
NILLPKLNFSIYNDFTIKELTLNGEKWIIYYIISPIYGWKYISMVPVDSFFEEIRKIRNL
SLFLLGFMSIIGSILIFFFSMQNYRPLSEIKRLLQAGSEAKSSEHEKNEFDFIRDLVVQT
LSKEEELKKQIMRFSPIIKNNLLYQLLLGSALPENIGELELKTLEMQKQDAKFLVCLIEI
DDCSGFIKEESDSEYSLVTLVVTNVMDELLETNGFKHWDVLFSRTRLSVIVEINDNVEDS
IKELSEIFENMIEFLEKNFSIYMSVGISGMVMGIINLKFAYEQAEKVLSLKFVKPNMKIF
KFSELSQDITSEKEFLPKDIENKIINVVKEGKVEGVYEVFENIKNHITAANSPHMAKMIL
IYLYGLYYQLLNSIPNKVGEKQKPEPEKVMRLIIEEKNPKKVLQTIQEDYKILAENVIVN
KQKIGNDLISNILDYIHQQYSSSEISLSTIADKFNITPQYLSAIFKEKTGQNISDYIQNL
RMHRAKELLLSTDYSVSQIAKMIGYTEVSGFTKAFKKFEGVSPNKFRELNKSQ
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaaaatattgtggcgatttgtcttttcatatcttgttatttttatcattccg
cttttgataggtattgggtcttattttagtataaaagacatcatgatgagtagcctatat
agatataacaaaactgcacttactcagcttgaggacaaggttgagaatgagattgtaaag
tctgttgaatctcttgcagattggataaatttaaatccatattattttatttttctacct
gaagccaaagaagcgcttgacagcagtgacagactccttaatatcagaaatctttgcaga
gaaatatattcacagacatataaaaattcatatataattgatgctttcatatacattcct
tctgagaacctcattgtaggtccgtcatatactacaacaccttataactactatacatat
ataaacagaccgcttgatatgagctatgaaaaatggcttgagtttttgagcggcgaatac
aaaatgaaatatataccttcttttaaaataaaagcagactataaaaatctttctacaatt
gtattcgcaaatactttatcacgatggataatagatggtaaaaatgcaaatgtgtttgta
ataatagaccaaagcaagattgtcagtacaatgaaagaaattgtaagctaccctaaaggg
atactttggattctggatagagacaacaatcaagttcttaaagtttctgcagaaaagcag
aatatattattgccaaaacttaacttttcaatatacaatgactttacaatcaaagagctt
acattaaacggtgaaaaatggataatatattatattatatcacctatttatggttggaaa
tatatatccatggtacctgttgacagtttttttgaagagatacgaaaaatacgtaatctg
agcctttttcttcttggatttatgagtattattggcagtatacttatatttttcttcagt
atgcaaaactacagaccgctgagtgagataaagagattgttgcaagcaggtagtgaagca
aagagttctgagcatgaaaagaacgaatttgattttataagagacctcgttgttcaaaca
ctttctaaagaagaggaactgaaaaagcaaataatgagattttctccaattataaaaaat
aatttattgtatcagttgcttcttggcagtgcattgcctgagaacataggtgaattagaa
ctaaaaacccttgaaatgcaaaaacaagatgcaaaatttttggtatgtttgatagaaata
gatgactgctcagggtttataaaagaagaaagtgatagtgaatattctcttgtaactctt
gttgttacaaacgttatggatgagcttttagagacaaatggtttcaaacactgggatgtt
ttgttttcaaggacaaggttgagtgttattgttgaaattaatgataatgttgaggatagt
attaaagagctttcagaaatatttgaaaatatgatagagtttttagagaaaaacttttca
atttatatgtctgtaggtataagcgggatggttatgggcataataaatttaaagtttgca
tatgagcaggccgaaaaagttctttcattgaaatttgtaaagcctaatatgaagattttc
aagttttctgagctctctcaagatataacgtccgaaaaggagtttttacccaaagacatt
gaaaacaaaattataaatgttgttaaagaaggtaaggttgaaggggtttatgaggtattt
gaaaatatcaaaaatcatataacagcggcaaactcacctcatatggccaagatgatactt
atatatctttatgggctttactatcaacttttaaacagtattccaaacaaagtcggggaa
aaacaaaaacctgaaccagaaaaggttatgaggttaataattgaagagaagaatcccaaa
aaggtccttcaaacaatacaggaagactataaaatacttgcagagaatgtgatagttaac
aagcagaaaataggcaatgacctgatttcaaatattttggactatattcatcagcagtat
tcaagctcagagatatcactttctacaatcgcagataagttcaatataactccgcagtat
ctttcagcaatcttcaaagaaaagacagggcagaatataagcgattatatccagaacttg
agaatgcacagagcaaaagaacttcttctgtcaaccgactattcggtgtctcagattgct
aagatgataggatacacagaggtaagtgggtttaccaaggctttcaagaagtttgagggt
gtatctcccaacaaattcagagagcttaacaaatcacagtaa
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