Caldicellulosiruptor kronotskyensis: Calkro_0418
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Entry
Calkro_0418 CDS
T01357
Name
(GenBank) transcriptional regulator, GntR family with LacI sensor
KO
K02103
GntR family transcriptional regulator, arabinose operon transcriptional repressor
Organism
ckn
Caldicellulosiruptor kronotskyensis
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ckn03000
]
Calkro_0418
Transcription factors [BR:
ckn03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Calkro_0418
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
GntR
Peripla_BP_4
HTH_11
Acetyltransf_4
HTH_DeoR
HTH_41
HTH_28
Rrf2
HTH_36
Fe_dep_repress
HVO_A0261_N
ProQ_C
Motif
Other DBs
NCBI-ProteinID:
ADQ45318
UniProt:
E4SE31
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Position
540433..541545
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AA seq
370 aa
AA seq
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MIKINLYIQDDGKMSKTKYELIKDFIIEGINSGKFKEGEKIYSENMLARKFKVSRHTVRR
AIMELEFEGLLVSLKGRGTFVAKKSADSSKCIAVLTTFISDYIFPLIIRGIEKVIAHEGY
GLLLFSTDNSYEFERYHLESIINNPNIDAVIIEPTKSALPSKNLELYKKLIQKDIPVIFI
NTILEEVTQNYIITKDQSAVYKLTTNLIKNGCKRLFGVFKGDDLQGIKRYRGFEKACKEA
NVEFDAIFFTSEEYNFVHKRAAEVISREKFDAVVCYNDKIALPLCVKLKEMGFRIPQDIS
VTGFDNSLLATLTDIKLTTVEHPKEKLGEMAAKATIAMIKKNKVHVSEEIECEIIYRNST
RGGIQECLKA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaataaacttgtatatacaagatgatggtaaaatgagtaagacaaaatatgaa
ttgataaaggatttcataattgagggtattaattctggcaaatttaaagagggagaaaag
atttattcagagaatatgcttgcaaggaagttcaaagtttcgcggcacactgtaagaaga
gctataatggagcttgaatttgaagggcttttggtatcgctaaaaggaagaggcacgttt
gttgcaaaaaagagtgcagacagttctaaatgtatcgcagttcttacaacatttatctct
gactatatctttccactaattataaggggaattgaaaaggttatagcacatgaaggttac
ggacttttactattttcaacagacaatagttacgagtttgaaagataccacttggaaagt
ataatcaacaaccccaatattgatgctgttataatagaacccacaaaaagtgcgctgcca
tccaaaaatctggaactttacaaaaagcttatacaaaaagacatacctgttatattcata
aacaccatcttagaagaagtgactcaaaactatataataacaaaagaccaatcggctgta
tataaacttactaccaaccttataaaaaatgggtgtaaaagactttttggtgtgttcaaa
ggtgatgacctgcaaggaataaaaaggtaccgtgggtttgaaaaagcctgcaaagaagcc
aatgtagaatttgatgcaatctttttcacaagtgaggaatacaattttgttcacaaaagg
gcagcagaggttatatcaagagaaaagtttgatgcagttgtctgttacaacgacaagatt
gctcttcctctttgtgttaagctaaaagaaatgggatttagaattccccaggatatatct
gttacagggtttgacaattcacttttagcaacattaacagatataaagctcacaacagtt
gaacatcctaaggaaaagcttggtgagatggcagcaaaagccactattgcaatgataaag
aaaaataaagtgcatgtaagtgaagaaatagagtgtgagattatttacaggaattctaca
agaggaggaatacaggaatgcttgaaagcttaa
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